Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cpsf4Q8BQZ5 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.24□□□□□ -0.45
Cpsf4Q8BQZ5 Gm27514-201ENSMUST00000183692 110 ntBASIC12.24□□□□□ -0.45
Cpsf4Q8BQZ5 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.24□□□□□ -0.45
Cpsf4Q8BQZ5 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cpsf4Q8BQZ5 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.24□□□□□ -0.45
Cpsf4Q8BQZ5 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cpsf4Q8BQZ5 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cpsf4Q8BQZ5 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cpsf4Q8BQZ5 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Cpsf4Q8BQZ5 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Cpsf4Q8BQZ5 Gm10268-201ENSMUST00000085340 555 ntBASIC12.24□□□□□ -0.45
Cpsf4Q8BQZ5 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cpsf4Q8BQZ5 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cpsf4Q8BQZ5 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cpsf4Q8BQZ5 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cpsf4Q8BQZ5 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cpsf4Q8BQZ5 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Cpsf4Q8BQZ5 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Gm5187-201ENSMUST00000117317 991 ntBASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Gm28693-202ENSMUST00000190758 331 ntBASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpsf4Q8BQZ5 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.22□□□□□ -0.45
Cpsf4Q8BQZ5 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cpsf4Q8BQZ5 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cpsf4Q8BQZ5 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cpsf4Q8BQZ5 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cpsf4Q8BQZ5 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cpsf4Q8BQZ5 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cpsf4Q8BQZ5 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.22□□□□□ -0.45
Cpsf4Q8BQZ5 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cpsf4Q8BQZ5 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.22□□□□□ -0.45
Cpsf4Q8BQZ5 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cpsf4Q8BQZ5 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cpsf4Q8BQZ5 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cpsf4Q8BQZ5 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cpsf4Q8BQZ5 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cpsf4Q8BQZ5 Mir686-201ENSMUST00000102174 109 ntBASIC12.22□□□□□ -0.45
Cpsf4Q8BQZ5 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cpsf4Q8BQZ5 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.22□□□□□ -0.45
Cpsf4Q8BQZ5 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cpsf4Q8BQZ5 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cpsf4Q8BQZ5 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.22□□□□□ -0.45
Cpsf4Q8BQZ5 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cpsf4Q8BQZ5 Gm26927-201ENSMUST00000182385 965 ntBASIC12.22□□□□□ -0.45
Cpsf4Q8BQZ5 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.22□□□□□ -0.45
Cpsf4Q8BQZ5 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cpsf4Q8BQZ5 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cpsf4Q8BQZ5 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms