Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Mir449b-201ENSMUST00000104833 80 ntBASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Gm29608-201ENSMUST00000190444 463 ntBASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Gm38144-201ENSMUST00000192790 465 ntBASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 AC138604.1-201ENSMUST00000226969 739 ntBASIC10.38□□□□□ -0.75
Smco3Q8BQM7 AC225888.1-201ENSMUST00000227184 728 ntBASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smco3Q8BQM7 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Smco3Q8BQM7 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco3Q8BQM7 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco3Q8BQM7 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
Smco3Q8BQM7 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco3Q8BQM7 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.37□□□□□ -0.75
Smco3Q8BQM7 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco3Q8BQM7 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Smco3Q8BQM7 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Smco3Q8BQM7 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Smco3Q8BQM7 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.37□□□□□ -0.75
Smco3Q8BQM7 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco3Q8BQM7 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.37□□□□□ -0.75
Smco3Q8BQM7 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco3Q8BQM7 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC10.37□□□□□ -0.75
Smco3Q8BQM7 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco3Q8BQM7 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Smco3Q8BQM7 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco3Q8BQM7 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC10.37□□□□□ -0.75
Smco3Q8BQM7 AC134335.2-201ENSMUST00000227660 440 ntBASIC10.37□□□□□ -0.75
Smco3Q8BQM7 Gm15222-202ENSMUST00000228667 1726 ntBASIC10.37□□□□□ -0.75
Smco3Q8BQM7 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco3Q8BQM7 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco3Q8BQM7 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco3Q8BQM7 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Smco3Q8BQM7 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco3Q8BQM7 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Smco3Q8BQM7 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco3Q8BQM7 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco3Q8BQM7 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco3Q8BQM7 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco3Q8BQM7 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco3Q8BQM7 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC10.37□□□□□ -0.75
Smco3Q8BQM7 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco3Q8BQM7 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Smco3Q8BQM7 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco3Q8BQM7 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco3Q8BQM7 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco3Q8BQM7 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco3Q8BQM7 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smco3Q8BQM7 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC10.36□□□□□ -0.75
Smco3Q8BQM7 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smco3Q8BQM7 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Smco3Q8BQM7 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smco3Q8BQM7 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.36□□□□□ -0.75
Smco3Q8BQM7 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Smco3Q8BQM7 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Smco3Q8BQM7 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
Smco3Q8BQM7 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Smco3Q8BQM7 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Smco3Q8BQM7 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Smco3Q8BQM7 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smco3Q8BQM7 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smco3Q8BQM7 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
Smco3Q8BQM7 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC10.36□□□□□ -0.75
Smco3Q8BQM7 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC10.36□□□□□ -0.75
Smco3Q8BQM7 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smco3Q8BQM7 Gm4995-201ENSMUST00000117247 432 ntBASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms