Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col16a1Q8BLX7 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
Col16a1Q8BLX7 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col16a1Q8BLX7 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col16a1Q8BLX7 Gm43677-201ENSMUST00000198098 2378 ntBASIC16.22■□□□□ 0.19
Col16a1Q8BLX7 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col16a1Q8BLX7 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Col16a1Q8BLX7 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Col16a1Q8BLX7 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col16a1Q8BLX7 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col16a1Q8BLX7 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col16a1Q8BLX7 Gm4879-201ENSMUST00000122190 1272 ntBASIC16.21■□□□□ 0.19
Col16a1Q8BLX7 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col16a1Q8BLX7 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC16.21■□□□□ 0.19
Col16a1Q8BLX7 Gm44270-201ENSMUST00000203084 1234 ntBASIC16.21■□□□□ 0.19
Col16a1Q8BLX7 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC16.21■□□□□ 0.19
Col16a1Q8BLX7 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Col16a1Q8BLX7 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col16a1Q8BLX7 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col16a1Q8BLX7 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Col16a1Q8BLX7 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col16a1Q8BLX7 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col16a1Q8BLX7 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Col16a1Q8BLX7 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col16a1Q8BLX7 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col16a1Q8BLX7 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Col16a1Q8BLX7 Gm37691-201ENSMUST00000192147 2573 ntBASIC16.21■□□□□ 0.19
Col16a1Q8BLX7 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col16a1Q8BLX7 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col16a1Q8BLX7 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col16a1Q8BLX7 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col16a1Q8BLX7 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Col16a1Q8BLX7 Gm13047-201ENSMUST00000117116 815 ntBASIC16.21■□□□□ 0.18
Col16a1Q8BLX7 Gm11663-201ENSMUST00000117888 290 ntBASIC16.21■□□□□ 0.18
Col16a1Q8BLX7 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Col16a1Q8BLX7 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Col16a1Q8BLX7 Ighv5-11-201ENSMUST00000193354 371 ntBASIC16.21■□□□□ 0.18
Col16a1Q8BLX7 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.18
Col16a1Q8BLX7 AC166341.2-201ENSMUST00000220571 120 ntBASIC16.21■□□□□ 0.18
Col16a1Q8BLX7 Gm6430-201ENSMUST00000054664 1248 ntBASIC16.21■□□□□ 0.18
Col16a1Q8BLX7 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
Col16a1Q8BLX7 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Col16a1Q8BLX7 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Col16a1Q8BLX7 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Col16a1Q8BLX7 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC16.21■□□□□ 0.18
Col16a1Q8BLX7 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC16.2■□□□□ 0.18
Col16a1Q8BLX7 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Col16a1Q8BLX7 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Col16a1Q8BLX7 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col16a1Q8BLX7 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC16.2■□□□□ 0.18
Col16a1Q8BLX7 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Col16a1Q8BLX7 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col16a1Q8BLX7 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Col16a1Q8BLX7 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col16a1Q8BLX7 Gm15725-201ENSMUST00000119947 1090 ntBASIC16.2■□□□□ 0.18
Col16a1Q8BLX7 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Col16a1Q8BLX7 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Col16a1Q8BLX7 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC16.2■□□□□ 0.18
Col16a1Q8BLX7 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC16.2■□□□□ 0.18
Col16a1Q8BLX7 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC16.2■□□□□ 0.18
Col16a1Q8BLX7 AC121960.1-201ENSMUST00000227982 564 ntBASIC16.2■□□□□ 0.18
Col16a1Q8BLX7 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col16a1Q8BLX7 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col16a1Q8BLX7 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Col16a1Q8BLX7 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Col16a1Q8BLX7 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col16a1Q8BLX7 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col16a1Q8BLX7 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Col16a1Q8BLX7 Gm43267-201ENSMUST00000199664 1796 ntBASIC16.19■□□□□ 0.18
Col16a1Q8BLX7 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Col16a1Q8BLX7 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col16a1Q8BLX7 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col16a1Q8BLX7 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Col16a1Q8BLX7 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Col16a1Q8BLX7 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col16a1Q8BLX7 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Col16a1Q8BLX7 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col16a1Q8BLX7 Gm8737-201ENSMUST00000122208 642 ntBASIC16.19■□□□□ 0.18
Col16a1Q8BLX7 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC16.19■□□□□ 0.18
Col16a1Q8BLX7 Gm4310-201ENSMUST00000177847 889 ntBASIC16.19■□□□□ 0.18
Col16a1Q8BLX7 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC16.19■□□□□ 0.18
Col16a1Q8BLX7 AC134860.1-201ENSMUST00000224867 660 ntBASIC16.19■□□□□ 0.18
Col16a1Q8BLX7 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col16a1Q8BLX7 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col16a1Q8BLX7 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Col16a1Q8BLX7 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col16a1Q8BLX7 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Col16a1Q8BLX7 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col16a1Q8BLX7 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col16a1Q8BLX7 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col16a1Q8BLX7 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.19■□□□□ 0.18
Col16a1Q8BLX7 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col16a1Q8BLX7 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col16a1Q8BLX7 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col16a1Q8BLX7 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Col16a1Q8BLX7 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col16a1Q8BLX7 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Col16a1Q8BLX7 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col16a1Q8BLX7 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col16a1Q8BLX7 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms