Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp54Q8BL06 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp54Q8BL06 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp54Q8BL06 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC17.59■□□□□ 0.41
Usp54Q8BL06 Gm3150-201ENSMUST00000166418 204 ntBASIC17.59■□□□□ 0.41
Usp54Q8BL06 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Usp54Q8BL06 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Usp54Q8BL06 Gm18367-201ENSMUST00000176139 600 ntBASIC17.59■□□□□ 0.41
Usp54Q8BL06 Gm37299-201ENSMUST00000193951 826 ntBASIC17.59■□□□□ 0.41
Usp54Q8BL06 Gm44329-201ENSMUST00000197469 112 ntBASIC17.59■□□□□ 0.41
Usp54Q8BL06 Gm18893-201ENSMUST00000198416 943 ntBASIC17.59■□□□□ 0.41
Usp54Q8BL06 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Usp54Q8BL06 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC17.59■□□□□ 0.41
Usp54Q8BL06 CT025551.1-201ENSMUST00000223996 692 ntBASIC17.59■□□□□ 0.41
Usp54Q8BL06 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp54Q8BL06 Gm5537-201ENSMUST00000091117 1252 ntBASIC17.59■□□□□ 0.41
Usp54Q8BL06 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Usp54Q8BL06 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Usp54Q8BL06 Gm43807-201ENSMUST00000200678 1781 ntBASIC17.59■□□□□ 0.41
Usp54Q8BL06 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp54Q8BL06 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp54Q8BL06 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp54Q8BL06 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp54Q8BL06 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp54Q8BL06 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp54Q8BL06 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Usp54Q8BL06 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Usp54Q8BL06 Gm8038-201ENSMUST00000164674 2044 ntBASIC17.58■□□□□ 0.41
Usp54Q8BL06 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Usp54Q8BL06 Gm11949-201ENSMUST00000117640 372 ntBASIC17.58■□□□□ 0.41
Usp54Q8BL06 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC17.58■□□□□ 0.41
Usp54Q8BL06 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC17.58■□□□□ 0.41
Usp54Q8BL06 Mir6998-201ENSMUST00000183343 64 ntBASIC17.58■□□□□ 0.41
Usp54Q8BL06 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Usp54Q8BL06 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC17.58■□□□□ 0.41
Usp54Q8BL06 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Usp54Q8BL06 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Usp54Q8BL06 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp54Q8BL06 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp54Q8BL06 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Usp54Q8BL06 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp54Q8BL06 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp54Q8BL06 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Usp54Q8BL06 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp54Q8BL06 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Usp54Q8BL06 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp54Q8BL06 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp54Q8BL06 Gm13916-201ENSMUST00000117368 628 ntBASIC17.57■□□□□ 0.4
Usp54Q8BL06 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC17.57■□□□□ 0.4
Usp54Q8BL06 Gm11836-201ENSMUST00000121022 441 ntBASIC17.57■□□□□ 0.4
Usp54Q8BL06 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Usp54Q8BL06 Gm9358-201ENSMUST00000183067 927 ntBASIC17.57■□□□□ 0.4
Usp54Q8BL06 Gm28388-201ENSMUST00000186262 437 ntBASIC17.57■□□□□ 0.4
Usp54Q8BL06 Gm38151-201ENSMUST00000195085 289 ntBASIC17.57■□□□□ 0.4
Usp54Q8BL06 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Usp54Q8BL06 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC17.57■□□□□ 0.4
Usp54Q8BL06 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp54Q8BL06 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp54Q8BL06 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp54Q8BL06 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp54Q8BL06 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC17.57■□□□□ 0.4
Usp54Q8BL06 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp54Q8BL06 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp54Q8BL06 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC17.57■□□□□ 0.4
Usp54Q8BL06 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp54Q8BL06 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp54Q8BL06 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp54Q8BL06 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Usp54Q8BL06 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp54Q8BL06 Gm44065-201ENSMUST00000203184 3527 ntBASIC17.57■□□□□ 0.4
Usp54Q8BL06 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp54Q8BL06 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp54Q8BL06 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp54Q8BL06 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp54Q8BL06 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Usp54Q8BL06 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Usp54Q8BL06 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC17.57■□□□□ 0.4
Usp54Q8BL06 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp54Q8BL06 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp54Q8BL06 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp54Q8BL06 Gm22920-201ENSMUST00000102175 109 ntBASIC17.57■□□□□ 0.4
Usp54Q8BL06 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Usp54Q8BL06 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp54Q8BL06 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp54Q8BL06 Gm14585-201ENSMUST00000120713 634 ntBASIC17.57■□□□□ 0.4
Usp54Q8BL06 Gm24844-201ENSMUST00000158679 127 ntBASIC17.57■□□□□ 0.4
Usp54Q8BL06 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC17.57■□□□□ 0.4
Usp54Q8BL06 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Usp54Q8BL06 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Usp54Q8BL06 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp54Q8BL06 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp54Q8BL06 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Usp54Q8BL06 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Usp54Q8BL06 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp54Q8BL06 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp54Q8BL06 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp54Q8BL06 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC17.56■□□□□ 0.4
Usp54Q8BL06 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Usp54Q8BL06 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp54Q8BL06 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms