Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cdhr3Q8BL00 Gm22121-201ENSMUST00000175148 54 ntBASIC11□□□□□ -0.65
Cdhr3Q8BL00 Proscos-202ENSMUST00000178990 666 ntBASIC11□□□□□ -0.65
Cdhr3Q8BL00 Gm8099-201ENSMUST00000200510 742 ntBASIC11□□□□□ -0.65
Cdhr3Q8BL00 Gm38671-201ENSMUST00000200573 130 ntBASIC11□□□□□ -0.65
Cdhr3Q8BL00 Cdk7-205ENSMUST00000225990 1159 ntBASIC11□□□□□ -0.65
Cdhr3Q8BL00 AC132317.1-201ENSMUST00000227227 962 ntBASIC11□□□□□ -0.65
Cdhr3Q8BL00 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdhr3Q8BL00 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdhr3Q8BL00 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Cdhr3Q8BL00 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11□□□□□ -0.65
Cdhr3Q8BL00 Gm2423-201ENSMUST00000074863 733 ntBASIC11□□□□□ -0.65
Cdhr3Q8BL00 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdhr3Q8BL00 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cdhr3Q8BL00 Paupar-201ENSMUST00000194826 3482 ntBASIC11□□□□□ -0.65
Cdhr3Q8BL00 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cdhr3Q8BL00 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Cdhr3Q8BL00 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11□□□□□ -0.65
Cdhr3Q8BL00 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11□□□□□ -0.65
Cdhr3Q8BL00 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cdhr3Q8BL00 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdhr3Q8BL00 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cdhr3Q8BL00 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Cdhr3Q8BL00 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cdhr3Q8BL00 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdhr3Q8BL00 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdhr3Q8BL00 Gm43417-201ENSMUST00000201586 5207 ntBASIC11□□□□□ -0.65
Cdhr3Q8BL00 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdhr3Q8BL00 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdhr3Q8BL00 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.99□□□□□ -0.65
Cdhr3Q8BL00 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Cdhr3Q8BL00 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cdhr3Q8BL00 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdhr3Q8BL00 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdhr3Q8BL00 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdhr3Q8BL00 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdhr3Q8BL00 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdhr3Q8BL00 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdhr3Q8BL00 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdhr3Q8BL00 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cdhr3Q8BL00 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Cdhr3Q8BL00 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC10.99□□□□□ -0.65
Cdhr3Q8BL00 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC10.99□□□□□ -0.65
Cdhr3Q8BL00 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdhr3Q8BL00 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdhr3Q8BL00 Gm44772-201ENSMUST00000207623 1191 ntBASIC10.99□□□□□ -0.65
Cdhr3Q8BL00 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC10.99□□□□□ -0.65
Cdhr3Q8BL00 Gm45668-201ENSMUST00000211271 493 ntBASIC10.99□□□□□ -0.65
Cdhr3Q8BL00 AC134254.1-201ENSMUST00000221362 167 ntBASIC10.99□□□□□ -0.65
Cdhr3Q8BL00 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdhr3Q8BL00 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdhr3Q8BL00 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC10.99□□□□□ -0.65
Cdhr3Q8BL00 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cdhr3Q8BL00 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdhr3Q8BL00 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Cdhr3Q8BL00 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Cdhr3Q8BL00 Gm5912-201ENSMUST00000122282 1438 ntBASIC10.99□□□□□ -0.65
Cdhr3Q8BL00 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cdhr3Q8BL00 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cdhr3Q8BL00 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Cdhr3Q8BL00 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdhr3Q8BL00 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdhr3Q8BL00 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdhr3Q8BL00 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.99□□□□□ -0.65
Cdhr3Q8BL00 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.99□□□□□ -0.65
Cdhr3Q8BL00 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdhr3Q8BL00 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Gm16479-201ENSMUST00000121706 932 ntBASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Gm7063-201ENSMUST00000186840 981 ntBASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms