Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.22□□□□□ -0.29
Ccdc40Q8BI79 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.22□□□□□ -0.29
Ccdc40Q8BI79 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc40Q8BI79 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.22□□□□□ -0.29
Ccdc40Q8BI79 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc40Q8BI79 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc40Q8BI79 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc40Q8BI79 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc40Q8BI79 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc40Q8BI79 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc40Q8BI79 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc40Q8BI79 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc40Q8BI79 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13.22□□□□□ -0.29
Ccdc40Q8BI79 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc40Q8BI79 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc40Q8BI79 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.22□□□□□ -0.29
Ccdc40Q8BI79 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc40Q8BI79 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.22□□□□□ -0.29
Ccdc40Q8BI79 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc40Q8BI79 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc40Q8BI79 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc40Q8BI79 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc40Q8BI79 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc40Q8BI79 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc40Q8BI79 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc40Q8BI79 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc40Q8BI79 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.21□□□□□ -0.29
Ccdc40Q8BI79 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc40Q8BI79 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc40Q8BI79 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc40Q8BI79 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ccdc40Q8BI79 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc40Q8BI79 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc40Q8BI79 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc40Q8BI79 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.21□□□□□ -0.29
Ccdc40Q8BI79 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Ccdc40Q8BI79 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.21□□□□□ -0.29
Ccdc40Q8BI79 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Ccdc40Q8BI79 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ccdc40Q8BI79 Gm13123-201ENSMUST00000122173 492 ntBASIC13.21□□□□□ -0.29
Ccdc40Q8BI79 Gm8810-201ENSMUST00000172895 754 ntBASIC13.21□□□□□ -0.29
Ccdc40Q8BI79 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc40Q8BI79 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc40Q8BI79 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ccdc40Q8BI79 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Ccdc40Q8BI79 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc40Q8BI79 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc40Q8BI79 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc40Q8BI79 AC122860.2-201ENSMUST00000217967 2671 ntBASIC13.21□□□□□ -0.3
Ccdc40Q8BI79 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Ccdc40Q8BI79 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ccdc40Q8BI79 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ccdc40Q8BI79 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Ccdc40Q8BI79 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Gm27486-201ENSMUST00000184923 80 ntBASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Gm10012-201ENSMUST00000078252 192 ntBASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms