Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf38Q8BI21 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf38Q8BI21 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.19□□□□□ -0.46
Rnf38Q8BI21 Gm14704-201ENSMUST00000120300 874 ntBASIC12.19□□□□□ -0.46
Rnf38Q8BI21 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf38Q8BI21 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf38Q8BI21 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.19□□□□□ -0.46
Rnf38Q8BI21 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf38Q8BI21 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf38Q8BI21 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Rnf38Q8BI21 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Rnf38Q8BI21 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf38Q8BI21 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf38Q8BI21 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf38Q8BI21 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf38Q8BI21 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf38Q8BI21 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf38Q8BI21 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf38Q8BI21 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf38Q8BI21 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf38Q8BI21 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.19□□□□□ -0.46
Rnf38Q8BI21 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.19□□□□□ -0.46
Rnf38Q8BI21 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Rnf38Q8BI21 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf38Q8BI21 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf38Q8BI21 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf38Q8BI21 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.19□□□□□ -0.46
Rnf38Q8BI21 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rnf38Q8BI21 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf38Q8BI21 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf38Q8BI21 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf38Q8BI21 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf38Q8BI21 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf38Q8BI21 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf38Q8BI21 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf38Q8BI21 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Rnf38Q8BI21 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Rnf38Q8BI21 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf38Q8BI21 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf38Q8BI21 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf38Q8BI21 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf38Q8BI21 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.18□□□□□ -0.46
Rnf38Q8BI21 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Rnf38Q8BI21 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf38Q8BI21 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf38Q8BI21 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.18□□□□□ -0.46
Rnf38Q8BI21 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf38Q8BI21 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf38Q8BI21 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.18□□□□□ -0.46
Rnf38Q8BI21 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Rnf38Q8BI21 Gm12138-201ENSMUST00000122180 951 ntBASIC12.18□□□□□ -0.46
Rnf38Q8BI21 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.18□□□□□ -0.46
Rnf38Q8BI21 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf38Q8BI21 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf38Q8BI21 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.18□□□□□ -0.46
Rnf38Q8BI21 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.18□□□□□ -0.46
Rnf38Q8BI21 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.18□□□□□ -0.46
Rnf38Q8BI21 Gm16372-201ENSMUST00000073088 450 ntBASIC12.18□□□□□ -0.46
Rnf38Q8BI21 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf38Q8BI21 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf38Q8BI21 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf38Q8BI21 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf38Q8BI21 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf38Q8BI21 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf38Q8BI21 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf38Q8BI21 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rnf38Q8BI21 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf38Q8BI21 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf38Q8BI21 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
Rnf38Q8BI21 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.17□□□□□ -0.46
Rnf38Q8BI21 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf38Q8BI21 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf38Q8BI21 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf38Q8BI21 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf38Q8BI21 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf38Q8BI21 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Rnf38Q8BI21 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf38Q8BI21 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf38Q8BI21 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Rnf38Q8BI21 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Rnf38Q8BI21 Snord83b-201ENSMUST00000104546 94 ntBASIC12.17□□□□□ -0.46
Rnf38Q8BI21 Gm11618-201ENSMUST00000117946 267 ntBASIC12.17□□□□□ -0.46
Rnf38Q8BI21 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.17□□□□□ -0.46
Rnf38Q8BI21 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.17□□□□□ -0.46
Rnf38Q8BI21 Gm14760-201ENSMUST00000121831 999 ntBASIC12.17□□□□□ -0.46
Rnf38Q8BI21 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.17□□□□□ -0.46
Rnf38Q8BI21 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf38Q8BI21 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.17□□□□□ -0.46
Rnf38Q8BI21 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf38Q8BI21 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.17□□□□□ -0.46
Rnf38Q8BI21 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.17□□□□□ -0.46
Rnf38Q8BI21 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Rnf38Q8BI21 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf38Q8BI21 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf38Q8BI21 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf38Q8BI21 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rnf38Q8BI21 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf38Q8BI21 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf38Q8BI21 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf38Q8BI21 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms