Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.08□□□□□ -0.48
Vrk1Q80X41 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.08□□□□□ -0.48
Vrk1Q80X41 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vrk1Q80X41 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Mir339-201ENSMUST00000083659 96 ntBASIC12.08□□□□□ -0.48
Vrk1Q80X41 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.08□□□□□ -0.48
Vrk1Q80X41 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vrk1Q80X41 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vrk1Q80X41 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vrk1Q80X41 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vrk1Q80X41 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vrk1Q80X41 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vrk1Q80X41 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.07□□□□□ -0.48
Vrk1Q80X41 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.07□□□□□ -0.48
Vrk1Q80X41 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vrk1Q80X41 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Vrk1Q80X41 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vrk1Q80X41 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Vrk1Q80X41 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Vrk1Q80X41 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.07□□□□□ -0.48
Vrk1Q80X41 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vrk1Q80X41 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vrk1Q80X41 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.07□□□□□ -0.48
Vrk1Q80X41 Mir5120-201ENSMUST00000175020 78 ntBASIC12.07□□□□□ -0.48
Vrk1Q80X41 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vrk1Q80X41 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vrk1Q80X41 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.07□□□□□ -0.48
Vrk1Q80X41 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vrk1Q80X41 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.07□□□□□ -0.48
Vrk1Q80X41 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vrk1Q80X41 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Vrk1Q80X41 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.07□□□□□ -0.48
Vrk1Q80X41 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vrk1Q80X41 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Vrk1Q80X41 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vrk1Q80X41 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Vrk1Q80X41 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vrk1Q80X41 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vrk1Q80X41 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vrk1Q80X41 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.07□□□□□ -0.48
Vrk1Q80X41 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vrk1Q80X41 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vrk1Q80X41 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vrk1Q80X41 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vrk1Q80X41 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vrk1Q80X41 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vrk1Q80X41 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vrk1Q80X41 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.07□□□□□ -0.48
Vrk1Q80X41 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vrk1Q80X41 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vrk1Q80X41 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.06□□□□□ -0.48
Vrk1Q80X41 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vrk1Q80X41 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.06□□□□□ -0.48
Vrk1Q80X41 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vrk1Q80X41 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Vrk1Q80X41 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vrk1Q80X41 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.06□□□□□ -0.48
Vrk1Q80X41 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vrk1Q80X41 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Vrk1Q80X41 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vrk1Q80X41 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vrk1Q80X41 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.06□□□□□ -0.48
Vrk1Q80X41 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vrk1Q80X41 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.06□□□□□ -0.48
Vrk1Q80X41 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.06□□□□□ -0.48
Vrk1Q80X41 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vrk1Q80X41 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vrk1Q80X41 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vrk1Q80X41 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Vrk1Q80X41 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vrk1Q80X41 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Vrk1Q80X41 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.06□□□□□ -0.48
Vrk1Q80X41 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms