Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 Gm13736-201ENSMUST00000119272 253 ntBASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 Gm13875-201ENSMUST00000120162 282 ntBASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh19Q80TF3 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdh19Q80TF3 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.4□□□□□ -0.43
Pcdh19Q80TF3 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdh19Q80TF3 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh19Q80TF3 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh19Q80TF3 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh19Q80TF3 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh19Q80TF3 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.39□□□□□ -0.43
Pcdh19Q80TF3 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh19Q80TF3 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Pcdh19Q80TF3 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh19Q80TF3 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh19Q80TF3 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.39□□□□□ -0.43
Pcdh19Q80TF3 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Pcdh19Q80TF3 Gm23270-201ENSMUST00000104055 131 ntBASIC12.39□□□□□ -0.43
Pcdh19Q80TF3 Gm25214-201ENSMUST00000104573 129 ntBASIC12.39□□□□□ -0.43
Pcdh19Q80TF3 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Pcdh19Q80TF3 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.39□□□□□ -0.43
Pcdh19Q80TF3 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh19Q80TF3 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh19Q80TF3 Gm25043-201ENSMUST00000158604 212 ntBASIC12.39□□□□□ -0.43
Pcdh19Q80TF3 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.39□□□□□ -0.43
Pcdh19Q80TF3 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Pcdh19Q80TF3 Gm27046-201ENSMUST00000182160 463 ntBASIC12.39□□□□□ -0.43
Pcdh19Q80TF3 Gm3096-201ENSMUST00000185770 364 ntBASIC12.39□□□□□ -0.43
Pcdh19Q80TF3 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.39□□□□□ -0.43
Pcdh19Q80TF3 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.39□□□□□ -0.43
Pcdh19Q80TF3 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.39□□□□□ -0.43
Pcdh19Q80TF3 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.39□□□□□ -0.43
Pcdh19Q80TF3 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh19Q80TF3 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh19Q80TF3 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh19Q80TF3 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Pcdh19Q80TF3 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh19Q80TF3 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh19Q80TF3 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh19Q80TF3 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh19Q80TF3 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Pcdh19Q80TF3 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh19Q80TF3 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh19Q80TF3 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh19Q80TF3 Rubie-203ENSMUST00000227803 2430 ntBASIC12.39□□□□□ -0.43
Pcdh19Q80TF3 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh19Q80TF3 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh19Q80TF3 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh19Q80TF3 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh19Q80TF3 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.38□□□□□ -0.43
Pcdh19Q80TF3 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.38□□□□□ -0.43
Pcdh19Q80TF3 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh19Q80TF3 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh19Q80TF3 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Pcdh19Q80TF3 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.38□□□□□ -0.43
Pcdh19Q80TF3 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh19Q80TF3 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Pcdh19Q80TF3 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.38□□□□□ -0.43
Pcdh19Q80TF3 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh19Q80TF3 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh19Q80TF3 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pcdh19Q80TF3 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Pcdh19Q80TF3 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.38□□□□□ -0.43
Pcdh19Q80TF3 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pcdh19Q80TF3 Gm11930-201ENSMUST00000117788 190 ntBASIC12.38□□□□□ -0.43
Pcdh19Q80TF3 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms