Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rif1Q6PR54 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rif1Q6PR54 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rif1Q6PR54 Gm14213-201ENSMUST00000119778 768 ntBASIC10.65□□□□□ -0.7
Rif1Q6PR54 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rif1Q6PR54 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rif1Q6PR54 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC10.65□□□□□ -0.7
Rif1Q6PR54 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rif1Q6PR54 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC10.65□□□□□ -0.7
Rif1Q6PR54 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC10.65□□□□□ -0.7
Rif1Q6PR54 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rif1Q6PR54 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rif1Q6PR54 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rif1Q6PR54 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rif1Q6PR54 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Rif1Q6PR54 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rif1Q6PR54 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC10.65□□□□□ -0.7
Rif1Q6PR54 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rif1Q6PR54 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rif1Q6PR54 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rif1Q6PR54 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rif1Q6PR54 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rif1Q6PR54 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Rif1Q6PR54 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Rif1Q6PR54 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Rif1Q6PR54 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC10.65□□□□□ -0.71
Rif1Q6PR54 Gm12684-201ENSMUST00000118675 999 ntBASIC10.65□□□□□ -0.71
Rif1Q6PR54 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC10.65□□□□□ -0.71
Rif1Q6PR54 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC10.65□□□□□ -0.71
Rif1Q6PR54 Gm9230-201ENSMUST00000188228 532 ntBASIC10.65□□□□□ -0.71
Rif1Q6PR54 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC10.65□□□□□ -0.71
Rif1Q6PR54 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Rif1Q6PR54 Gm5700-201ENSMUST00000191483 989 ntBASIC10.65□□□□□ -0.71
Rif1Q6PR54 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
Rif1Q6PR54 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Rif1Q6PR54 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Rif1Q6PR54 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Rif1Q6PR54 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC10.65□□□□□ -0.71
Rif1Q6PR54 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC10.65□□□□□ -0.71
Rif1Q6PR54 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Rif1Q6PR54 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Rif1Q6PR54 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Rif1Q6PR54 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Rif1Q6PR54 Gm5641-201ENSMUST00000091130 1488 ntBASIC10.64□□□□□ -0.71
Rif1Q6PR54 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Rif1Q6PR54 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Rif1Q6PR54 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC10.64□□□□□ -0.71
Rif1Q6PR54 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Rif1Q6PR54 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Rif1Q6PR54 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC10.64□□□□□ -0.71
Rif1Q6PR54 Gm12736-201ENSMUST00000119330 236 ntBASIC10.64□□□□□ -0.71
Rif1Q6PR54 Gm23085-201ENSMUST00000157849 293 ntBASIC10.64□□□□□ -0.71
Rif1Q6PR54 Gm15744-201ENSMUST00000161734 213 ntBASIC10.64□□□□□ -0.71
Rif1Q6PR54 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Rif1Q6PR54 Mir8115-201ENSMUST00000184992 119 ntBASIC10.64□□□□□ -0.71
Rif1Q6PR54 Gm9116-201ENSMUST00000192400 1018 ntBASIC10.64□□□□□ -0.71
Rif1Q6PR54 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC10.64□□□□□ -0.71
Rif1Q6PR54 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC10.64□□□□□ -0.71
Rif1Q6PR54 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Rif1Q6PR54 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Rif1Q6PR54 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Rif1Q6PR54 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Rif1Q6PR54 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Rif1Q6PR54 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.64□□□□□ -0.71
Rif1Q6PR54 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Rif1Q6PR54 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC10.64□□□□□ -0.71
Rif1Q6PR54 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC10.64□□□□□ -0.71
Rif1Q6PR54 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Rif1Q6PR54 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Rif1Q6PR54 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Rif1Q6PR54 Prr13-205ENSMUST00000171245 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Rif1Q6PR54 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Rif1Q6PR54 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC10.64□□□□□ -0.71
Rif1Q6PR54 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Rif1Q6PR54 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Rif1Q6PR54 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Rif1Q6PR54 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Rif1Q6PR54 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC10.64□□□□□ -0.71
Rif1Q6PR54 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Rif1Q6PR54 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Rif1Q6PR54 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Rif1Q6PR54 Gm37852-201ENSMUST00000193027 350 ntBASIC10.64□□□□□ -0.71
Rif1Q6PR54 Gm2345-201ENSMUST00000193451 589 ntBASIC10.64□□□□□ -0.71
Rif1Q6PR54 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Rif1Q6PR54 AC105408.1-201ENSMUST00000227771 802 ntBASIC10.64□□□□□ -0.71
Rif1Q6PR54 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Rif1Q6PR54 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Rif1Q6PR54 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Rif1Q6PR54 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Rif1Q6PR54 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rif1Q6PR54 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC10.63□□□□□ -0.71
Rif1Q6PR54 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rif1Q6PR54 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rif1Q6PR54 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rif1Q6PR54 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rif1Q6PR54 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Rif1Q6PR54 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Rif1Q6PR54 Zkscan14-203ENSMUST00000198959 2243 ntBASIC10.63□□□□□ -0.71
Rif1Q6PR54 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Rif1Q6PR54 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC10.63□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms