Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Krt39Q6IFX4 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Krt39Q6IFX4 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Krt39Q6IFX4 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Krt39Q6IFX4 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.92□□□□□ -0.18
Krt39Q6IFX4 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Krt39Q6IFX4 Snord83b-201ENSMUST00000104546 94 ntBASIC13.92□□□□□ -0.18
Krt39Q6IFX4 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Krt39Q6IFX4 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Krt39Q6IFX4 Gm10156-201ENSMUST00000122364 462 ntBASIC13.92□□□□□ -0.18
Krt39Q6IFX4 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Krt39Q6IFX4 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Krt39Q6IFX4 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.92□□□□□ -0.18
Krt39Q6IFX4 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Krt39Q6IFX4 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.92□□□□□ -0.18
Krt39Q6IFX4 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.92□□□□□ -0.18
Krt39Q6IFX4 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.92□□□□□ -0.18
Krt39Q6IFX4 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Krt39Q6IFX4 Gm5356-201ENSMUST00000093326 615 ntBASIC13.92□□□□□ -0.18
Krt39Q6IFX4 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Krt39Q6IFX4 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Krt39Q6IFX4 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Krt39Q6IFX4 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Krt39Q6IFX4 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.92□□□□□ -0.18
Krt39Q6IFX4 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Krt39Q6IFX4 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Krt39Q6IFX4 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.92□□□□□ -0.18
Krt39Q6IFX4 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Krt39Q6IFX4 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Krt39Q6IFX4 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Krt39Q6IFX4 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Krt39Q6IFX4 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.91□□□□□ -0.18
Krt39Q6IFX4 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Krt39Q6IFX4 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Krt39Q6IFX4 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Krt39Q6IFX4 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Krt39Q6IFX4 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Krt39Q6IFX4 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Krt39Q6IFX4 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Krt39Q6IFX4 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.91□□□□□ -0.18
Krt39Q6IFX4 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Krt39Q6IFX4 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Krt39Q6IFX4 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC13.91□□□□□ -0.18
Krt39Q6IFX4 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Krt39Q6IFX4 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Krt39Q6IFX4 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Krt39Q6IFX4 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Krt39Q6IFX4 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
Krt39Q6IFX4 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Krt39Q6IFX4 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Krt39Q6IFX4 Gm23363-201ENSMUST00000175024 79 ntBASIC13.91□□□□□ -0.18
Krt39Q6IFX4 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.91□□□□□ -0.18
Krt39Q6IFX4 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.91□□□□□ -0.18
Krt39Q6IFX4 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Krt39Q6IFX4 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Krt39Q6IFX4 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Krt39Q6IFX4 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Krt39Q6IFX4 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Krt39Q6IFX4 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Krt39Q6IFX4 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Krt39Q6IFX4 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Krt39Q6IFX4 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Krt39Q6IFX4 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.91□□□□□ -0.18
Krt39Q6IFX4 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Krt39Q6IFX4 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Krt39Q6IFX4 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Krt39Q6IFX4 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Krt39Q6IFX4 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Krt39Q6IFX4 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Krt39Q6IFX4 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Krt39Q6IFX4 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Krt39Q6IFX4 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Krt39Q6IFX4 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Krt39Q6IFX4 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt39Q6IFX4 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt39Q6IFX4 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.9□□□□□ -0.18
Krt39Q6IFX4 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Krt39Q6IFX4 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt39Q6IFX4 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Krt39Q6IFX4 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt39Q6IFX4 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt39Q6IFX4 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.9□□□□□ -0.18
Krt39Q6IFX4 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt39Q6IFX4 Paupar-201ENSMUST00000194826 3482 ntBASIC13.9□□□□□ -0.18
Krt39Q6IFX4 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt39Q6IFX4 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Krt39Q6IFX4 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt39Q6IFX4 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt39Q6IFX4 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Krt39Q6IFX4 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt39Q6IFX4 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.9□□□□□ -0.18
Krt39Q6IFX4 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Krt39Q6IFX4 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Krt39Q6IFX4 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Krt39Q6IFX4 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Krt39Q6IFX4 Gm17208-201ENSMUST00000168388 535 ntBASIC13.9□□□□□ -0.18
Krt39Q6IFX4 Gm27390-201ENSMUST00000184516 176 ntBASIC13.9□□□□□ -0.18
Krt39Q6IFX4 Gm27892-201ENSMUST00000185017 106 ntBASIC13.9□□□□□ -0.18
Krt39Q6IFX4 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt39Q6IFX4 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms