Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col11a2Q64739 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col11a2Q64739 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col11a2Q64739 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC14.91□□□□□ -0.02
Col11a2Q64739 Gm23272-201ENSMUST00000104053 129 ntBASIC14.91□□□□□ -0.02
Col11a2Q64739 Gm13022-201ENSMUST00000121181 285 ntBASIC14.91□□□□□ -0.02
Col11a2Q64739 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC14.91□□□□□ -0.02
Col11a2Q64739 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC14.91□□□□□ -0.02
Col11a2Q64739 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Col11a2Q64739 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC14.91□□□□□ -0.02
Col11a2Q64739 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.91□□□□□ -0.02
Col11a2Q64739 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC14.91□□□□□ -0.02
Col11a2Q64739 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Col11a2Q64739 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col11a2Q64739 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col11a2Q64739 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col11a2Q64739 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col11a2Q64739 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Col11a2Q64739 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col11a2Q64739 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col11a2Q64739 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col11a2Q64739 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col11a2Q64739 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col11a2Q64739 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col11a2Q64739 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
Col11a2Q64739 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col11a2Q64739 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Col11a2Q64739 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC14.9□□□□□ -0.02
Col11a2Q64739 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Col11a2Q64739 AC238811.4-201ENSMUST00000178019 1246 ntBASIC14.9□□□□□ -0.02
Col11a2Q64739 AC238940.3-201ENSMUST00000178830 1246 ntBASIC14.9□□□□□ -0.02
Col11a2Q64739 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col11a2Q64739 Gm4604-201ENSMUST00000025040 390 ntBASIC14.9□□□□□ -0.02
Col11a2Q64739 Gm25201-201ENSMUST00000083093 170 ntBASIC14.9□□□□□ -0.02
Col11a2Q64739 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col11a2Q64739 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col11a2Q64739 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col11a2Q64739 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Col11a2Q64739 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Col11a2Q64739 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Col11a2Q64739 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col11a2Q64739 Gm5385-201ENSMUST00000118988 1559 ntBASIC14.9□□□□□ -0.02
Col11a2Q64739 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.9□□□□□ -0.02
Col11a2Q64739 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Col11a2Q64739 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col11a2Q64739 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col11a2Q64739 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Col11a2Q64739 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Col11a2Q64739 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col11a2Q64739 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC14.9□□□□□ -0.02
Col11a2Q64739 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col11a2Q64739 Gm25766-201ENSMUST00000104101 131 ntBASIC14.89□□□□□ -0.03
Col11a2Q64739 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col11a2Q64739 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col11a2Q64739 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Col11a2Q64739 Gm45410-201ENSMUST00000211331 1093 ntBASIC14.89□□□□□ -0.03
Col11a2Q64739 Gm19640-201ENSMUST00000214849 464 ntBASIC14.89□□□□□ -0.03
Col11a2Q64739 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col11a2Q64739 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col11a2Q64739 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col11a2Q64739 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col11a2Q64739 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col11a2Q64739 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col11a2Q64739 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col11a2Q64739 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col11a2Q64739 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col11a2Q64739 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col11a2Q64739 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Col11a2Q64739 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Col11a2Q64739 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col11a2Q64739 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col11a2Q64739 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col11a2Q64739 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col11a2Q64739 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col11a2Q64739 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col11a2Q64739 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col11a2Q64739 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col11a2Q64739 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col11a2Q64739 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.89□□□□□ -0.03
Col11a2Q64739 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col11a2Q64739 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.89□□□□□ -0.03
Col11a2Q64739 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col11a2Q64739 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col11a2Q64739 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
Col11a2Q64739 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col11a2Q64739 Gm18782-201ENSMUST00000209023 1399 ntBASIC14.89□□□□□ -0.03
Col11a2Q64739 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Col11a2Q64739 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col11a2Q64739 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC14.89□□□□□ -0.03
Col11a2Q64739 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col11a2Q64739 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col11a2Q64739 Gm44315-201ENSMUST00000203041 219 ntBASIC14.89□□□□□ -0.03
Col11a2Q64739 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col11a2Q64739 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col11a2Q64739 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col11a2Q64739 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col11a2Q64739 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col11a2Q64739 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col11a2Q64739 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Col11a2Q64739 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms