Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.43□□□□□ -0.42
VclQ64727 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VclQ64727 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VclQ64727 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VclQ64727 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
VclQ64727 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VclQ64727 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VclQ64727 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
VclQ64727 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.43□□□□□ -0.42
VclQ64727 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VclQ64727 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
VclQ64727 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
VclQ64727 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
VclQ64727 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
VclQ64727 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VclQ64727 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.43□□□□□ -0.42
VclQ64727 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VclQ64727 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VclQ64727 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.43□□□□□ -0.42
VclQ64727 Gm12241-201ENSMUST00000118330 726 ntBASIC12.43□□□□□ -0.42
VclQ64727 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
VclQ64727 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VclQ64727 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.43□□□□□ -0.42
VclQ64727 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
VclQ64727 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.43□□□□□ -0.42
VclQ64727 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.43□□□□□ -0.42
VclQ64727 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
VclQ64727 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.43□□□□□ -0.42
VclQ64727 Olfr284-202ENSMUST00000206647 966 ntBASIC12.43□□□□□ -0.42
VclQ64727 Gm10608-202ENSMUST00000213924 676 ntBASIC12.43□□□□□ -0.42
VclQ64727 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VclQ64727 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VclQ64727 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VclQ64727 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
VclQ64727 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VclQ64727 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VclQ64727 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VclQ64727 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VclQ64727 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VclQ64727 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.43□□□□□ -0.42
VclQ64727 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VclQ64727 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VclQ64727 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
VclQ64727 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.43□□□□□ -0.42
VclQ64727 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.43□□□□□ -0.42
VclQ64727 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VclQ64727 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VclQ64727 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
VclQ64727 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VclQ64727 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VclQ64727 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VclQ64727 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
VclQ64727 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VclQ64727 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VclQ64727 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
VclQ64727 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VclQ64727 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
VclQ64727 Gm27501-201ENSMUST00000183599 107 ntBASIC12.42□□□□□ -0.42
VclQ64727 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
VclQ64727 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.42□□□□□ -0.42
VclQ64727 Gm6007-201ENSMUST00000208170 823 ntBASIC12.42□□□□□ -0.42
VclQ64727 Gm9368-201ENSMUST00000219348 831 ntBASIC12.42□□□□□ -0.42
VclQ64727 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VclQ64727 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.42□□□□□ -0.42
VclQ64727 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.42□□□□□ -0.42
VclQ64727 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VclQ64727 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VclQ64727 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
VclQ64727 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
VclQ64727 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VclQ64727 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
VclQ64727 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VclQ64727 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VclQ64727 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VclQ64727 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VclQ64727 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VclQ64727 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VclQ64727 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VclQ64727 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
VclQ64727 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
VclQ64727 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VclQ64727 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
VclQ64727 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
VclQ64727 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.41□□□□□ -0.42
VclQ64727 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
VclQ64727 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VclQ64727 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VclQ64727 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.41□□□□□ -0.42
VclQ64727 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.41□□□□□ -0.42
VclQ64727 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VclQ64727 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
VclQ64727 Gm4986-201ENSMUST00000119731 549 ntBASIC12.41□□□□□ -0.42
VclQ64727 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
VclQ64727 Gm13786-201ENSMUST00000122371 333 ntBASIC12.41□□□□□ -0.42
VclQ64727 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.41□□□□□ -0.42
VclQ64727 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
VclQ64727 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.41□□□□□ -0.42
VclQ64727 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
VclQ64727 Gm38092-201ENSMUST00000195600 653 ntBASIC12.41□□□□□ -0.42
VclQ64727 Gm43179-201ENSMUST00000198797 275 ntBASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms