Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
Foxc1Q61572 Gm6152-201ENSMUST00000151704 340 ntBASIC9.53□□□□□ -0.88
Foxc1Q61572 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC9.53□□□□□ -0.88
Foxc1Q61572 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC9.53□□□□□ -0.88
Foxc1Q61572 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC9.53□□□□□ -0.88
Foxc1Q61572 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Foxc1Q61572 Gm20854-202ENSMUST00000181549 1156 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Foxc1Q61572 Gm28450-201ENSMUST00000187349 638 ntBASIC9.53□□□□□ -0.88
Foxc1Q61572 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Foxc1Q61572 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC9.53□□□□□ -0.88
Foxc1Q61572 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Foxc1Q61572 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC9.53□□□□□ -0.88
Foxc1Q61572 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Foxc1Q61572 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC9.53□□□□□ -0.88
Foxc1Q61572 Gm21089-201ENSMUST00000215843 325 ntBASIC9.53□□□□□ -0.88
Foxc1Q61572 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Foxc1Q61572 AC173210.1-201ENSMUST00000222341 1131 ntBASIC9.53□□□□□ -0.88
Foxc1Q61572 AC110817.1-201ENSMUST00000225706 605 ntBASIC9.53□□□□□ -0.88
Foxc1Q61572 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Foxc1Q61572 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Foxc1Q61572 Gm10617-201ENSMUST00000098368 1172 ntBASIC9.53□□□□□ -0.88
Foxc1Q61572 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC9.53□□□□□ -0.88
Foxc1Q61572 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Foxc1Q61572 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Foxc1Q61572 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Foxc1Q61572 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Foxc1Q61572 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Foxc1Q61572 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Foxc1Q61572 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Foxc1Q61572 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC9.53□□□□□ -0.88
Foxc1Q61572 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Foxc1Q61572 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Foxc1Q61572 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Foxc1Q61572 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Foxc1Q61572 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Foxc1Q61572 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Foxc1Q61572 Ctsll3-201ENSMUST00000043754 1337 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Foxc1Q61572 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Foxc1Q61572 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Foxc1Q61572 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC9.53□□□□□ -0.88
Foxc1Q61572 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Foxc1Q61572 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
Foxc1Q61572 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Foxc1Q61572 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Foxc1Q61572 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Foxc1Q61572 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC9.52□□□□□ -0.88
Foxc1Q61572 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
Foxc1Q61572 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
Foxc1Q61572 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Foxc1Q61572 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC9.52□□□□□ -0.88
Foxc1Q61572 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Foxc1Q61572 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.88
Foxc1Q61572 2810006K23Rik-201ENSMUST00000077376 1677 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Foxc1Q61572 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Foxc1Q61572 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Foxc1Q61572 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Foxc1Q61572 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Foxc1Q61572 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Foxc1Q61572 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Foxc1Q61572 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Foxc1Q61572 Gm5687-201ENSMUST00000118252 640 ntBASIC9.52□□□□□ -0.89
Foxc1Q61572 Gm13313-201ENSMUST00000118938 1084 ntBASIC9.52□□□□□ -0.89
Foxc1Q61572 Gm13792-201ENSMUST00000121350 423 ntBASIC9.52□□□□□ -0.89
Foxc1Q61572 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Foxc1Q61572 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC9.52□□□□□ -0.89
Foxc1Q61572 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Foxc1Q61572 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Foxc1Q61572 Gm17420-201ENSMUST00000164753 153 ntBASIC9.52□□□□□ -0.89
Foxc1Q61572 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Foxc1Q61572 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Foxc1Q61572 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Foxc1Q61572 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Foxc1Q61572 Gm27847-201ENSMUST00000183711 107 ntBASIC9.52□□□□□ -0.89
Foxc1Q61572 Gm27375-201ENSMUST00000183799 107 ntBASIC9.52□□□□□ -0.89
Foxc1Q61572 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Foxc1Q61572 Gm28649-201ENSMUST00000189153 1581 ntBASIC9.52□□□□□ -0.89
Foxc1Q61572 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC9.52□□□□□ -0.89
Foxc1Q61572 9930120I10Rik-201ENSMUST00000203027 865 ntBASIC9.52□□□□□ -0.89
Foxc1Q61572 Gm34701-202ENSMUST00000204685 360 ntBASIC9.52□□□□□ -0.89
Foxc1Q61572 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Foxc1Q61572 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC9.52□□□□□ -0.89
Foxc1Q61572 4930466K18Rik-201ENSMUST00000219458 906 ntBASIC9.52□□□□□ -0.89
Foxc1Q61572 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Foxc1Q61572 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC9.52□□□□□ -0.89
Foxc1Q61572 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC9.52□□□□□ -0.89
Foxc1Q61572 Gm7049-201ENSMUST00000223520 1712 ntBASIC9.52□□□□□ -0.89
Foxc1Q61572 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Foxc1Q61572 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC9.52□□□□□ -0.89
Foxc1Q61572 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Foxc1Q61572 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Foxc1Q61572 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Foxc1Q61572 Tmem212-201ENSMUST00000058077 716 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Foxc1Q61572 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Foxc1Q61572 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Foxc1Q61572 Rps25-201ENSMUST00000080300 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Foxc1Q61572 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Foxc1Q61572 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Foxc1Q61572 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC9.52□□□□□ -0.89
Foxc1Q61572 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Foxc1Q61572 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms