Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd1Q61466 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd1Q61466 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Smarcd1Q61466 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd1Q61466 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd1Q61466 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd1Q61466 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd1Q61466 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd1Q61466 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Smarcd1Q61466 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd1Q61466 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd1Q61466 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.12□□□□□ -0.31
Smarcd1Q61466 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd1Q61466 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd1Q61466 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.12□□□□□ -0.31
Smarcd1Q61466 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Smarcd1Q61466 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd1Q61466 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd1Q61466 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd1Q61466 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd1Q61466 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd1Q61466 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd1Q61466 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd1Q61466 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd1Q61466 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd1Q61466 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd1Q61466 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.12□□□□□ -0.31
Smarcd1Q61466 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd1Q61466 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd1Q61466 Gm38000-201ENSMUST00000192390 1215 ntBASIC13.12□□□□□ -0.31
Smarcd1Q61466 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC13.12□□□□□ -0.31
Smarcd1Q61466 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.12□□□□□ -0.31
Smarcd1Q61466 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.12□□□□□ -0.31
Smarcd1Q61466 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Smarcd1Q61466 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.12□□□□□ -0.31
Smarcd1Q61466 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Smarcd1Q61466 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Smarcd1Q61466 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd1Q61466 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Smarcd1Q61466 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd1Q61466 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.12□□□□□ -0.31
Smarcd1Q61466 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd1Q61466 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Smarcd1Q61466 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd1Q61466 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.12□□□□□ -0.31
Smarcd1Q61466 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd1Q61466 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd1Q61466 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.11□□□□□ -0.31
Smarcd1Q61466 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd1Q61466 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Smarcd1Q61466 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Smarcd1Q61466 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.11□□□□□ -0.31
Smarcd1Q61466 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.11□□□□□ -0.31
Smarcd1Q61466 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd1Q61466 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd1Q61466 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd1Q61466 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Smarcd1Q61466 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd1Q61466 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd1Q61466 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd1Q61466 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.31
Smarcd1Q61466 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.11□□□□□ -0.31
Smarcd1Q61466 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Smarcd1Q61466 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Smarcd1Q61466 Gm11930-201ENSMUST00000117788 190 ntBASIC13.11□□□□□ -0.31
Smarcd1Q61466 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.11□□□□□ -0.31
Smarcd1Q61466 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.11□□□□□ -0.31
Smarcd1Q61466 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.11□□□□□ -0.31
Smarcd1Q61466 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd1Q61466 Gm25668-201ENSMUST00000157700 129 ntBASIC13.11□□□□□ -0.31
Smarcd1Q61466 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd1Q61466 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.11□□□□□ -0.31
Smarcd1Q61466 Gm27243-201ENSMUST00000183964 521 ntBASIC13.11□□□□□ -0.31
Smarcd1Q61466 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.11□□□□□ -0.31
Smarcd1Q61466 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd1Q61466 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Smarcd1Q61466 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.11□□□□□ -0.31
Smarcd1Q61466 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd1Q61466 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd1Q61466 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd1Q61466 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC13.11□□□□□ -0.31
Smarcd1Q61466 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Smarcd1Q61466 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd1Q61466 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd1Q61466 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.11□□□□□ -0.31
Smarcd1Q61466 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd1Q61466 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcd1Q61466 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcd1Q61466 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcd1Q61466 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcd1Q61466 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcd1Q61466 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcd1Q61466 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcd1Q61466 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcd1Q61466 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcd1Q61466 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.1□□□□□ -0.31
Smarcd1Q61466 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Smarcd1Q61466 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcd1Q61466 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcd1Q61466 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms