Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Six4Q61321 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Six4Q61321 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.38
Six4Q61321 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Six4Q61321 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Six4Q61321 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Six4Q61321 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
Six4Q61321 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Six4Q61321 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Six4Q61321 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.7□□□□□ -0.38
Six4Q61321 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Six4Q61321 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Six4Q61321 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Six4Q61321 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Six4Q61321 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Six4Q61321 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Six4Q61321 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.7□□□□□ -0.38
Six4Q61321 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.7□□□□□ -0.38
Six4Q61321 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Six4Q61321 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Six4Q61321 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.7□□□□□ -0.38
Six4Q61321 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Six4Q61321 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Six4Q61321 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.7□□□□□ -0.38
Six4Q61321 Gm13297-201ENSMUST00000120205 934 ntBASIC12.7□□□□□ -0.38
Six4Q61321 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Six4Q61321 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
Six4Q61321 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.7□□□□□ -0.38
Six4Q61321 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.7□□□□□ -0.38
Six4Q61321 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.7□□□□□ -0.38
Six4Q61321 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Six4Q61321 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.7□□□□□ -0.38
Six4Q61321 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.7□□□□□ -0.38
Six4Q61321 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.7□□□□□ -0.38
Six4Q61321 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.7□□□□□ -0.38
Six4Q61321 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Six4Q61321 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Six4Q61321 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Six4Q61321 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Six4Q61321 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Six4Q61321 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Six4Q61321 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Six4Q61321 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Six4Q61321 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Six4Q61321 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Six4Q61321 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Six4Q61321 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Six4Q61321 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.7□□□□□ -0.38
Six4Q61321 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Six4Q61321 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Six4Q61321 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Six4Q61321 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Six4Q61321 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Six4Q61321 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Six4Q61321 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Six4Q61321 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Six4Q61321 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Six4Q61321 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Six4Q61321 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Six4Q61321 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Six4Q61321 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Six4Q61321 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Six4Q61321 Gm10434-201ENSMUST00000101158 471 ntBASIC12.69□□□□□ -0.38
Six4Q61321 Gm25214-201ENSMUST00000104573 129 ntBASIC12.69□□□□□ -0.38
Six4Q61321 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Six4Q61321 Gm12314-201ENSMUST00000118104 538 ntBASIC12.69□□□□□ -0.38
Six4Q61321 Gm12058-201ENSMUST00000118614 437 ntBASIC12.69□□□□□ -0.38
Six4Q61321 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.69□□□□□ -0.38
Six4Q61321 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Six4Q61321 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.69□□□□□ -0.38
Six4Q61321 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Six4Q61321 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Six4Q61321 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Six4Q61321 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.69□□□□□ -0.38
Six4Q61321 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.69□□□□□ -0.38
Six4Q61321 Gm6334-201ENSMUST00000207083 228 ntBASIC12.69□□□□□ -0.38
Six4Q61321 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Six4Q61321 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.69□□□□□ -0.38
Six4Q61321 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Six4Q61321 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Six4Q61321 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Six4Q61321 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Six4Q61321 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.69□□□□□ -0.38
Six4Q61321 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Six4Q61321 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Six4Q61321 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Six4Q61321 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Six4Q61321 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Six4Q61321 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Six4Q61321 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Six4Q61321 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Six4Q61321 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Six4Q61321 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Six4Q61321 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Six4Q61321 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Six4Q61321 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Six4Q61321 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.69□□□□□ -0.38
Six4Q61321 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.69□□□□□ -0.38
Six4Q61321 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Six4Q61321 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms