Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col12a1Q60847 Gm11619-201ENSMUST00000117474 237 ntBASIC12.12□□□□□ -0.47
Col12a1Q60847 Gm11511-201ENSMUST00000118146 540 ntBASIC12.12□□□□□ -0.47
Col12a1Q60847 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col12a1Q60847 Gm45758-201ENSMUST00000212448 1006 ntBASIC12.12□□□□□ -0.47
Col12a1Q60847 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.12□□□□□ -0.47
Col12a1Q60847 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col12a1Q60847 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col12a1Q60847 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col12a1Q60847 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Col12a1Q60847 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Col12a1Q60847 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Col12a1Q60847 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col12a1Q60847 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Col12a1Q60847 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col12a1Q60847 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col12a1Q60847 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col12a1Q60847 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.11□□□□□ -0.47
Col12a1Q60847 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col12a1Q60847 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col12a1Q60847 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col12a1Q60847 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col12a1Q60847 Gm11560-201ENSMUST00000117567 948 ntBASIC12.11□□□□□ -0.47
Col12a1Q60847 Gm35960-201ENSMUST00000202712 767 ntBASIC12.11□□□□□ -0.47
Col12a1Q60847 Gm23680-201ENSMUST00000083162 164 ntBASIC12.11□□□□□ -0.47
Col12a1Q60847 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col12a1Q60847 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col12a1Q60847 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col12a1Q60847 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col12a1Q60847 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col12a1Q60847 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col12a1Q60847 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col12a1Q60847 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col12a1Q60847 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col12a1Q60847 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col12a1Q60847 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.11□□□□□ -0.47
Col12a1Q60847 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col12a1Q60847 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.11□□□□□ -0.47
Col12a1Q60847 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.11□□□□□ -0.47
Col12a1Q60847 Gm12407-201ENSMUST00000180219 324 ntBASIC12.11□□□□□ -0.47
Col12a1Q60847 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col12a1Q60847 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col12a1Q60847 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col12a1Q60847 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col12a1Q60847 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col12a1Q60847 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col12a1Q60847 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col12a1Q60847 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col12a1Q60847 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.11□□□□□ -0.47
Col12a1Q60847 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col12a1Q60847 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Col12a1Q60847 Gm23272-201ENSMUST00000104053 129 ntBASIC12.11□□□□□ -0.47
Col12a1Q60847 Gm3329-201ENSMUST00000159873 556 ntBASIC12.11□□□□□ -0.47
Col12a1Q60847 AC154759.1-201ENSMUST00000224137 1159 ntBASIC12.11□□□□□ -0.47
Col12a1Q60847 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col12a1Q60847 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Col12a1Q60847 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.1□□□□□ -0.47
Col12a1Q60847 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col12a1Q60847 Gm11500-201ENSMUST00000118237 601 ntBASIC12.1□□□□□ -0.47
Col12a1Q60847 Gm6322-201ENSMUST00000118789 1004 ntBASIC12.1□□□□□ -0.47
Col12a1Q60847 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col12a1Q60847 Gm16167-201ENSMUST00000160428 1065 ntBASIC12.1□□□□□ -0.47
Col12a1Q60847 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC12.1□□□□□ -0.47
Col12a1Q60847 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col12a1Q60847 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.1□□□□□ -0.47
Col12a1Q60847 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.1□□□□□ -0.47
Col12a1Q60847 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC12.1□□□□□ -0.47
Col12a1Q60847 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col12a1Q60847 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC12.1□□□□□ -0.47
Col12a1Q60847 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col12a1Q60847 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col12a1Q60847 Gm4900-201ENSMUST00000222046 1628 ntBASIC12.1□□□□□ -0.47
Col12a1Q60847 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Col12a1Q60847 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col12a1Q60847 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col12a1Q60847 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.1□□□□□ -0.47
Col12a1Q60847 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col12a1Q60847 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col12a1Q60847 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col12a1Q60847 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col12a1Q60847 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col12a1Q60847 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.1□□□□□ -0.47
Col12a1Q60847 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Col12a1Q60847 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col12a1Q60847 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col12a1Q60847 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col12a1Q60847 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC12.1□□□□□ -0.47
Col12a1Q60847 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col12a1Q60847 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.1□□□□□ -0.47
Col12a1Q60847 Gm17214-201ENSMUST00000164501 541 ntBASIC12.1□□□□□ -0.47
Col12a1Q60847 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC12.1□□□□□ -0.47
Col12a1Q60847 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC12.1□□□□□ -0.47
Col12a1Q60847 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col12a1Q60847 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Col12a1Q60847 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.1□□□□□ -0.47
Col12a1Q60847 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col12a1Q60847 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col12a1Q60847 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col12a1Q60847 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Col12a1Q60847 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms