Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfaip3Q60769 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfaip3Q60769 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfaip3Q60769 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfaip3Q60769 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfaip3Q60769 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfaip3Q60769 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfaip3Q60769 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfaip3Q60769 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfaip3Q60769 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfaip3Q60769 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Tnfaip3Q60769 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfaip3Q60769 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.9□□□□□ -0.5
Tnfaip3Q60769 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Tnfaip3Q60769 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfaip3Q60769 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfaip3Q60769 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfaip3Q60769 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Tnfaip3Q60769 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfaip3Q60769 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.9□□□□□ -0.5
Tnfaip3Q60769 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfaip3Q60769 Gm16296-201ENSMUST00000159905 325 ntBASIC11.9□□□□□ -0.5
Tnfaip3Q60769 Gm2991-201ENSMUST00000173338 480 ntBASIC11.9□□□□□ -0.5
Tnfaip3Q60769 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfaip3Q60769 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.9□□□□□ -0.5
Tnfaip3Q60769 Gm6334-201ENSMUST00000207083 228 ntBASIC11.9□□□□□ -0.5
Tnfaip3Q60769 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.9□□□□□ -0.5
Tnfaip3Q60769 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.9□□□□□ -0.5
Tnfaip3Q60769 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfaip3Q60769 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfaip3Q60769 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfaip3Q60769 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfaip3Q60769 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfaip3Q60769 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfaip3Q60769 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Tnfaip3Q60769 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfaip3Q60769 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Tnfaip3Q60769 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfaip3Q60769 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.9□□□□□ -0.5
Tnfaip3Q60769 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfaip3Q60769 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfaip3Q60769 AC107453.4-201ENSMUST00000227068 1817 ntBASIC11.9□□□□□ -0.5
Tnfaip3Q60769 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.9□□□□□ -0.5
Tnfaip3Q60769 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.9□□□□□ -0.5
Tnfaip3Q60769 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfaip3Q60769 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfaip3Q60769 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfaip3Q60769 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfaip3Q60769 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Tnfaip3Q60769 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Tnfaip3Q60769 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Tnfaip3Q60769 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Tnfaip3Q60769 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Tnfaip3Q60769 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Tnfaip3Q60769 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Tnfaip3Q60769 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Tnfaip3Q60769 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Tnfaip3Q60769 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Tnfaip3Q60769 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfaip3Q60769 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfaip3Q60769 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.89□□□□□ -0.51
Tnfaip3Q60769 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfaip3Q60769 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfaip3Q60769 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfaip3Q60769 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfaip3Q60769 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfaip3Q60769 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfaip3Q60769 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfaip3Q60769 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfaip3Q60769 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.89□□□□□ -0.51
Tnfaip3Q60769 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.89□□□□□ -0.51
Tnfaip3Q60769 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfaip3Q60769 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfaip3Q60769 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfaip3Q60769 Gm11222-201ENSMUST00000119005 738 ntBASIC11.89□□□□□ -0.51
Tnfaip3Q60769 Gm11964-201ENSMUST00000120982 444 ntBASIC11.89□□□□□ -0.51
Tnfaip3Q60769 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfaip3Q60769 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.89□□□□□ -0.51
Tnfaip3Q60769 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Tnfaip3Q60769 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Tnfaip3Q60769 Gm6621-201ENSMUST00000193251 772 ntBASIC11.89□□□□□ -0.51
Tnfaip3Q60769 Gm38341-201ENSMUST00000195357 515 ntBASIC11.89□□□□□ -0.51
Tnfaip3Q60769 Gm45865-201ENSMUST00000211815 945 ntBASIC11.89□□□□□ -0.51
Tnfaip3Q60769 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfaip3Q60769 Gm45925-201ENSMUST00000218882 744 ntBASIC11.89□□□□□ -0.51
Tnfaip3Q60769 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.89□□□□□ -0.51
Tnfaip3Q60769 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfaip3Q60769 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.89□□□□□ -0.51
Tnfaip3Q60769 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.89□□□□□ -0.51
Tnfaip3Q60769 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfaip3Q60769 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
Tnfaip3Q60769 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfaip3Q60769 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfaip3Q60769 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfaip3Q60769 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Tnfaip3Q60769 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfaip3Q60769 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Tnfaip3Q60769 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfaip3Q60769 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfaip3Q60769 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms