Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.14□□□□□ -0.31
Satb1Q60611 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Satb1Q60611 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Satb1Q60611 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Satb1Q60611 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.14□□□□□ -0.31
Satb1Q60611 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.14□□□□□ -0.31
Satb1Q60611 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC13.14□□□□□ -0.31
Satb1Q60611 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Satb1Q60611 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.14□□□□□ -0.31
Satb1Q60611 Gm18041-201ENSMUST00000218210 618 ntBASIC13.14□□□□□ -0.31
Satb1Q60611 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.14□□□□□ -0.31
Satb1Q60611 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Satb1Q60611 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Satb1Q60611 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Satb1Q60611 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Satb1Q60611 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Satb1Q60611 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Satb1Q60611 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Satb1Q60611 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Satb1Q60611 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Satb1Q60611 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.14□□□□□ -0.31
Satb1Q60611 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Satb1Q60611 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Satb1Q60611 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Satb1Q60611 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Satb1Q60611 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Satb1Q60611 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Satb1Q60611 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Satb1Q60611 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Satb1Q60611 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Satb1Q60611 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Satb1Q60611 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Satb1Q60611 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Satb1Q60611 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Satb1Q60611 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Satb1Q60611 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Satb1Q60611 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Satb1Q60611 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Satb1Q60611 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Satb1Q60611 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Satb1Q60611 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Satb1Q60611 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Satb1Q60611 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Satb1Q60611 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Satb1Q60611 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Satb1Q60611 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.13□□□□□ -0.31
Satb1Q60611 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Satb1Q60611 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Satb1Q60611 Gm16202-201ENSMUST00000117532 544 ntBASIC13.13□□□□□ -0.31
Satb1Q60611 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Satb1Q60611 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC13.13□□□□□ -0.31
Satb1Q60611 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC13.13□□□□□ -0.31
Satb1Q60611 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Satb1Q60611 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.13□□□□□ -0.31
Satb1Q60611 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Satb1Q60611 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.13□□□□□ -0.31
Satb1Q60611 Gm18893-201ENSMUST00000198416 943 ntBASIC13.13□□□□□ -0.31
Satb1Q60611 Gm44069-201ENSMUST00000204898 506 ntBASIC13.13□□□□□ -0.31
Satb1Q60611 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Satb1Q60611 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.13□□□□□ -0.31
Satb1Q60611 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Satb1Q60611 Spcs1-203ENSMUST00000226374 592 ntBASIC13.13□□□□□ -0.31
Satb1Q60611 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Satb1Q60611 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Satb1Q60611 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.13□□□□□ -0.31
Satb1Q60611 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Satb1Q60611 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Satb1Q60611 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Satb1Q60611 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Satb1Q60611 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Satb1Q60611 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Satb1Q60611 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Satb1Q60611 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Satb1Q60611 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Satb1Q60611 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Satb1Q60611 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Satb1Q60611 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Satb1Q60611 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Satb1Q60611 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Satb1Q60611 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Satb1Q60611 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Satb1Q60611 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Satb1Q60611 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Satb1Q60611 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Satb1Q60611 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Satb1Q60611 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Satb1Q60611 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Satb1Q60611 Pck2-205ENSMUST00000226352 2784 ntBASIC13.12□□□□□ -0.31
Satb1Q60611 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Satb1Q60611 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Satb1Q60611 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Satb1Q60611 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Satb1Q60611 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Satb1Q60611 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Satb1Q60611 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Satb1Q60611 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Satb1Q60611 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Satb1Q60611 Gm11531-201ENSMUST00000117614 555 ntBASIC13.12□□□□□ -0.31
Satb1Q60611 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.12□□□□□ -0.31
Satb1Q60611 Gm23699-201ENSMUST00000158835 135 ntBASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms