Protein–RNA interactions for Protein: Q5F4S9

Trpm3, Transient receptor potential cation channel, subfamily M, member 3, mousemouse

Predictions only

Length 1,721 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm3Q5F4S9 Gm43447-201ENSMUST00000198471 1535 ntBASIC15.68■□□□□ 0.1
Trpm3Q5F4S9 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trpm3Q5F4S9 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trpm3Q5F4S9 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trpm3Q5F4S9 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trpm3Q5F4S9 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trpm3Q5F4S9 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC15.68■□□□□ 0.1
Trpm3Q5F4S9 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trpm3Q5F4S9 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trpm3Q5F4S9 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trpm3Q5F4S9 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Trpm3Q5F4S9 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
Trpm3Q5F4S9 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC15.68■□□□□ 0.1
Trpm3Q5F4S9 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Trpm3Q5F4S9 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trpm3Q5F4S9 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trpm3Q5F4S9 Mir7677-201ENSMUST00000184226 67 ntBASIC15.68■□□□□ 0.1
Trpm3Q5F4S9 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC15.68■□□□□ 0.1
Trpm3Q5F4S9 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trpm3Q5F4S9 AC151275.1-201ENSMUST00000224870 585 ntBASIC15.68■□□□□ 0.1
Trpm3Q5F4S9 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trpm3Q5F4S9 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trpm3Q5F4S9 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trpm3Q5F4S9 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trpm3Q5F4S9 Gm6580-201ENSMUST00000117504 1357 ntBASIC15.67■□□□□ 0.1
Trpm3Q5F4S9 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trpm3Q5F4S9 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trpm3Q5F4S9 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trpm3Q5F4S9 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Trpm3Q5F4S9 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trpm3Q5F4S9 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trpm3Q5F4S9 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trpm3Q5F4S9 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.67■□□□□ 0.1
Trpm3Q5F4S9 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trpm3Q5F4S9 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
Trpm3Q5F4S9 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trpm3Q5F4S9 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trpm3Q5F4S9 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trpm3Q5F4S9 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trpm3Q5F4S9 Gm12579-201ENSMUST00000118040 783 ntBASIC15.67■□□□□ 0.1
Trpm3Q5F4S9 Mup-ps26-201ENSMUST00000121751 202 ntBASIC15.67■□□□□ 0.1
Trpm3Q5F4S9 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC15.67■□□□□ 0.1
Trpm3Q5F4S9 Gm5732-201ENSMUST00000182596 1007 ntBASIC15.67■□□□□ 0.1
Trpm3Q5F4S9 Gm38228-201ENSMUST00000193169 1293 ntBASIC15.67■□□□□ 0.1
Trpm3Q5F4S9 Gm38117-201ENSMUST00000194653 939 ntBASIC15.67■□□□□ 0.1
Trpm3Q5F4S9 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC15.67■□□□□ 0.1
Trpm3Q5F4S9 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trpm3Q5F4S9 Gm9797-202ENSMUST00000218003 294 ntBASIC15.67■□□□□ 0.1
Trpm3Q5F4S9 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trpm3Q5F4S9 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trpm3Q5F4S9 Rnf17-202ENSMUST00000223627 2077 ntBASIC15.67■□□□□ 0.1
Trpm3Q5F4S9 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trpm3Q5F4S9 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
Trpm3Q5F4S9 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Trpm3Q5F4S9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trpm3Q5F4S9 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trpm3Q5F4S9 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trpm3Q5F4S9 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trpm3Q5F4S9 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trpm3Q5F4S9 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trpm3Q5F4S9 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trpm3Q5F4S9 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trpm3Q5F4S9 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trpm3Q5F4S9 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trpm3Q5F4S9 Gm14724-201ENSMUST00000118400 537 ntBASIC15.66■□□□□ 0.1
Trpm3Q5F4S9 Gm12029-201ENSMUST00000120073 832 ntBASIC15.66■□□□□ 0.1
Trpm3Q5F4S9 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC15.66■□□□□ 0.1
Trpm3Q5F4S9 Ighv1-60-201ENSMUST00000195816 405 ntBASIC15.66■□□□□ 0.1
Trpm3Q5F4S9 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC15.66■□□□□ 0.1
Trpm3Q5F4S9 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC15.66■□□□□ 0.1
Trpm3Q5F4S9 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trpm3Q5F4S9 Adra1a-206ENSMUST00000225182 2337 ntBASIC15.66■□□□□ 0.1
Trpm3Q5F4S9 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trpm3Q5F4S9 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trpm3Q5F4S9 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trpm3Q5F4S9 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trpm3Q5F4S9 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trpm3Q5F4S9 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trpm3Q5F4S9 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trpm3Q5F4S9 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trpm3Q5F4S9 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Trpm3Q5F4S9 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trpm3Q5F4S9 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trpm3Q5F4S9 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trpm3Q5F4S9 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trpm3Q5F4S9 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trpm3Q5F4S9 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trpm3Q5F4S9 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC15.66■□□□□ 0.1
Trpm3Q5F4S9 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trpm3Q5F4S9 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trpm3Q5F4S9 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trpm3Q5F4S9 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trpm3Q5F4S9 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trpm3Q5F4S9 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC15.65■□□□□ 0.1
Trpm3Q5F4S9 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC15.65■□□□□ 0.1
Trpm3Q5F4S9 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trpm3Q5F4S9 Gm23085-201ENSMUST00000157849 293 ntBASIC15.65■□□□□ 0.1
Trpm3Q5F4S9 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC15.65■□□□□ 0.1
Trpm3Q5F4S9 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trpm3Q5F4S9 Gm37905-201ENSMUST00000195310 341 ntBASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms