Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43aQ3TL54 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43aQ3TL54 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trim43aQ3TL54 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.38□□□□□ -0.27
Trim43aQ3TL54 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.38□□□□□ -0.27
Trim43aQ3TL54 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43aQ3TL54 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trim43aQ3TL54 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43aQ3TL54 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43aQ3TL54 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43aQ3TL54 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43aQ3TL54 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43aQ3TL54 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43aQ3TL54 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.37□□□□□ -0.27
Trim43aQ3TL54 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43aQ3TL54 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trim43aQ3TL54 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43aQ3TL54 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43aQ3TL54 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43aQ3TL54 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.37□□□□□ -0.27
Trim43aQ3TL54 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim43aQ3TL54 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43aQ3TL54 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43aQ3TL54 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.37□□□□□ -0.27
Trim43aQ3TL54 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.37□□□□□ -0.27
Trim43aQ3TL54 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim43aQ3TL54 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.37□□□□□ -0.27
Trim43aQ3TL54 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43aQ3TL54 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43aQ3TL54 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.37□□□□□ -0.27
Trim43aQ3TL54 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43aQ3TL54 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43aQ3TL54 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim43aQ3TL54 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trim43aQ3TL54 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trim43aQ3TL54 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43aQ3TL54 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43aQ3TL54 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim43aQ3TL54 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43aQ3TL54 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
Trim43aQ3TL54 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43aQ3TL54 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim43aQ3TL54 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim43aQ3TL54 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Gm14921-201ENSMUST00000118643 908 ntBASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Gm28911-201ENSMUST00000188837 117 ntBASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Gm43433-201ENSMUST00000196573 481 ntBASIC13.36□□□□□ -0.27
Trim43aQ3TL54 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim43aQ3TL54 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.36□□□□□ -0.27
Trim43aQ3TL54 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trim43aQ3TL54 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43aQ3TL54 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim43aQ3TL54 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43aQ3TL54 Gm43174-201ENSMUST00000195914 2445 ntBASIC13.35□□□□□ -0.27
Trim43aQ3TL54 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43aQ3TL54 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43aQ3TL54 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43aQ3TL54 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Trim43aQ3TL54 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43aQ3TL54 Arhgef3-204ENSMUST00000225949 3198 ntBASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms