Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Gm8227-201ENSMUST00000223306 571 ntBASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Gm36908-201ENSMUST00000218080 1662 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Gm10603-201ENSMUST00000183512 2279 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Gm43817-201ENSMUST00000196459 2262 ntBASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccbe1Q3MI99 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 Gm37333-201ENSMUST00000192904 2251 ntBASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 Mir6990-201ENSMUST00000183724 91 ntBASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 CT030684.1-201ENSMUST00000227292 914 ntBASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 Gm28581-201ENSMUST00000186086 2177 ntBASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccbe1Q3MI99 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccbe1Q3MI99 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccbe1Q3MI99 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.4□□□□□ -0.58
Ccbe1Q3MI99 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccbe1Q3MI99 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccbe1Q3MI99 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccbe1Q3MI99 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccbe1Q3MI99 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccbe1Q3MI99 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.4□□□□□ -0.58
Ccbe1Q3MI99 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccbe1Q3MI99 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms