Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.22□□□□□ -0.61
Chd8Q09XV5 Gm42375-201ENSMUST00000206226 745 ntTSL 5 BASIC11.22□□□□□ -0.61
Chd8Q09XV5 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.22□□□□□ -0.61
Chd8Q09XV5 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd8Q09XV5 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chd8Q09XV5 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Chd8Q09XV5 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd8Q09XV5 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd8Q09XV5 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chd8Q09XV5 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd8Q09XV5 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd8Q09XV5 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC11.22□□□□□ -0.61
Chd8Q09XV5 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd8Q09XV5 Gm13827-201ENSMUST00000148801 372 ntBASIC11.22□□□□□ -0.61
Chd8Q09XV5 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.22□□□□□ -0.61
Chd8Q09XV5 Ighv5-1-201ENSMUST00000193324 353 ntBASIC11.22□□□□□ -0.61
Chd8Q09XV5 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chd8Q09XV5 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd8Q09XV5 Olfr761-201ENSMUST00000049620 1029 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Chd8Q09XV5 Olfr127-201ENSMUST00000076331 1095 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Chd8Q09XV5 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd8Q09XV5 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd8Q09XV5 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd8Q09XV5 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Chd8Q09XV5 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd8Q09XV5 AC158777.1-201ENSMUST00000226216 1724 ntBASIC11.21□□□□□ -0.61
Chd8Q09XV5 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd8Q09XV5 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd8Q09XV5 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Chd8Q09XV5 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Chd8Q09XV5 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd8Q09XV5 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd8Q09XV5 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd8Q09XV5 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd8Q09XV5 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd8Q09XV5 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Chd8Q09XV5 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd8Q09XV5 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Chd8Q09XV5 Gm11996-201ENSMUST00000117538 915 ntBASIC11.21□□□□□ -0.61
Chd8Q09XV5 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.21□□□□□ -0.61
Chd8Q09XV5 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Chd8Q09XV5 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd8Q09XV5 Gm5190-201ENSMUST00000192434 357 ntBASIC11.21□□□□□ -0.61
Chd8Q09XV5 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Chd8Q09XV5 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd8Q09XV5 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd8Q09XV5 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd8Q09XV5 Fxyd7-201ENSMUST00000073892 693 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd8Q09XV5 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd8Q09XV5 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
Chd8Q09XV5 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd8Q09XV5 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Chd8Q09XV5 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chd8Q09XV5 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chd8Q09XV5 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.62
Chd8Q09XV5 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chd8Q09XV5 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.21□□□□□ -0.62
Chd8Q09XV5 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chd8Q09XV5 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chd8Q09XV5 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Chd8Q09XV5 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.21□□□□□ -0.62
Chd8Q09XV5 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chd8Q09XV5 Gm43697-201ENSMUST00000199637 2581 ntBASIC11.21□□□□□ -0.62
Chd8Q09XV5 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chd8Q09XV5 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC11.21□□□□□ -0.62
Chd8Q09XV5 Mir1190-201ENSMUST00000116925 96 ntBASIC11.21□□□□□ -0.62
Chd8Q09XV5 Gm13094-201ENSMUST00000117930 409 ntBASIC11.21□□□□□ -0.62
Chd8Q09XV5 Gm22379-201ENSMUST00000157480 131 ntBASIC11.21□□□□□ -0.62
Chd8Q09XV5 Gm9487-201ENSMUST00000216600 472 ntBASIC11.21□□□□□ -0.62
Chd8Q09XV5 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC11.21□□□□□ -0.62
Chd8Q09XV5 Gm9791-201ENSMUST00000060997 447 ntBASIC11.21□□□□□ -0.62
Chd8Q09XV5 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
Chd8Q09XV5 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
Chd8Q09XV5 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chd8Q09XV5 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC11.21□□□□□ -0.62
Chd8Q09XV5 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.2□□□□□ -0.62
Chd8Q09XV5 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd8Q09XV5 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.2□□□□□ -0.62
Chd8Q09XV5 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Chn2-209ENSMUST00000146114 1227 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms