Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf1Q07802 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf1Q07802 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.8□□□□□ -0.36
Ebf1Q07802 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf1Q07802 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf1Q07802 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf1Q07802 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf1Q07802 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf1Q07802 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf1Q07802 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.8□□□□□ -0.36
Ebf1Q07802 Gm14109-201ENSMUST00000118814 309 ntBASIC12.8□□□□□ -0.36
Ebf1Q07802 Gm14704-201ENSMUST00000120300 874 ntBASIC12.8□□□□□ -0.36
Ebf1Q07802 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf1Q07802 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Ebf1Q07802 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ebf1Q07802 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.8□□□□□ -0.36
Ebf1Q07802 Gm42997-202ENSMUST00000200321 985 ntBASIC12.8□□□□□ -0.36
Ebf1Q07802 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.8□□□□□ -0.36
Ebf1Q07802 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.8□□□□□ -0.36
Ebf1Q07802 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Ebf1Q07802 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.8□□□□□ -0.36
Ebf1Q07802 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf1Q07802 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf1Q07802 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf1Q07802 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.8□□□□□ -0.36
Ebf1Q07802 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf1Q07802 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf1Q07802 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf1Q07802 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.8□□□□□ -0.36
Ebf1Q07802 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf1Q07802 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf1Q07802 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf1Q07802 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.79□□□□□ -0.36
Ebf1Q07802 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf1Q07802 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf1Q07802 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf1Q07802 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf1Q07802 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf1Q07802 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Ebf1Q07802 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ebf1Q07802 Gm14263-201ENSMUST00000117955 746 ntBASIC12.79□□□□□ -0.36
Ebf1Q07802 Gm12058-201ENSMUST00000118614 437 ntBASIC12.79□□□□□ -0.36
Ebf1Q07802 Gm12217-201ENSMUST00000118858 696 ntBASIC12.79□□□□□ -0.36
Ebf1Q07802 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.79□□□□□ -0.36
Ebf1Q07802 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf1Q07802 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf1Q07802 Gm26361-201ENSMUST00000158868 186 ntBASIC12.79□□□□□ -0.36
Ebf1Q07802 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ebf1Q07802 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.79□□□□□ -0.36
Ebf1Q07802 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.79□□□□□ -0.36
Ebf1Q07802 Gm3096-201ENSMUST00000185770 364 ntBASIC12.79□□□□□ -0.36
Ebf1Q07802 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.79□□□□□ -0.36
Ebf1Q07802 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.79□□□□□ -0.36
Ebf1Q07802 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Ebf1Q07802 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.79□□□□□ -0.36
Ebf1Q07802 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf1Q07802 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ebf1Q07802 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf1Q07802 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf1Q07802 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf1Q07802 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf1Q07802 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf1Q07802 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf1Q07802 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Ebf1Q07802 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf1Q07802 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.79□□□□□ -0.36
Ebf1Q07802 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf1Q07802 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf1Q07802 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf1Q07802 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf1Q07802 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf1Q07802 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.79□□□□□ -0.36
Ebf1Q07802 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.79□□□□□ -0.36
Ebf1Q07802 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ebf1Q07802 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf1Q07802 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf1Q07802 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf1Q07802 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf1Q07802 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf1Q07802 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf1Q07802 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf1Q07802 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ebf1Q07802 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf1Q07802 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf1Q07802 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf1Q07802 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf1Q07802 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf1Q07802 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf1Q07802 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ebf1Q07802 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf1Q07802 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.78□□□□□ -0.36
Ebf1Q07802 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.78□□□□□ -0.36
Ebf1Q07802 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.78□□□□□ -0.36
Ebf1Q07802 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf1Q07802 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf1Q07802 Mir6927-201ENSMUST00000184494 71 ntBASIC12.78□□□□□ -0.36
Ebf1Q07802 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf1Q07802 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf1Q07802 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf1Q07802 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms