Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Col17a1Q07563 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col17a1Q07563 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Col17a1Q07563 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Col17a1Q07563 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Col17a1Q07563 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Col17a1Q07563 Ighv1-70-201ENSMUST00000196509 351 ntBASIC18.92■□□□□ 0.62
Col17a1Q07563 Gm42655-201ENSMUST00000202782 1134 ntBASIC18.92■□□□□ 0.62
Col17a1Q07563 Gm8574-201ENSMUST00000203207 924 ntBASIC18.92■□□□□ 0.62
Col17a1Q07563 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC18.92■□□□□ 0.62
Col17a1Q07563 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col17a1Q07563 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col17a1Q07563 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col17a1Q07563 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC18.92■□□□□ 0.62
Col17a1Q07563 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Col17a1Q07563 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Col17a1Q07563 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col17a1Q07563 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col17a1Q07563 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Col17a1Q07563 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col17a1Q07563 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
Col17a1Q07563 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Col17a1Q07563 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col17a1Q07563 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col17a1Q07563 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Col17a1Q07563 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col17a1Q07563 Gm15626-201ENSMUST00000117478 868 ntBASIC18.91■□□□□ 0.62
Col17a1Q07563 Gm16441-201ENSMUST00000138176 924 ntBASIC18.91■□□□□ 0.62
Col17a1Q07563 Mir7088-201ENSMUST00000184227 86 ntBASIC18.91■□□□□ 0.62
Col17a1Q07563 Gm29543-201ENSMUST00000188138 967 ntBASIC18.91■□□□□ 0.62
Col17a1Q07563 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Col17a1Q07563 AC164618.2-201ENSMUST00000224770 573 ntBASIC18.91■□□□□ 0.62
Col17a1Q07563 AC164099.1-201ENSMUST00000227780 333 ntBASIC18.91■□□□□ 0.62
Col17a1Q07563 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col17a1Q07563 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Col17a1Q07563 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col17a1Q07563 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Col17a1Q07563 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC18.91■□□□□ 0.62
Col17a1Q07563 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col17a1Q07563 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col17a1Q07563 Gm26513-201ENSMUST00000181802 2489 ntBASIC18.91■□□□□ 0.62
Col17a1Q07563 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Col17a1Q07563 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC18.91■□□□□ 0.62
Col17a1Q07563 AC173482.6-201ENSMUST00000225889 1741 ntBASIC18.91■□□□□ 0.62
Col17a1Q07563 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col17a1Q07563 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Col17a1Q07563 Gm42769-201ENSMUST00000198576 1659 ntBASIC18.91■□□□□ 0.62
Col17a1Q07563 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col17a1Q07563 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col17a1Q07563 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col17a1Q07563 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Col17a1Q07563 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Col17a1Q07563 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col17a1Q07563 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col17a1Q07563 Gm22661-201ENSMUST00000104192 132 ntBASIC18.9■□□□□ 0.62
Col17a1Q07563 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC18.9■□□□□ 0.62
Col17a1Q07563 Gm15615-201ENSMUST00000118876 198 ntBASIC18.9■□□□□ 0.62
Col17a1Q07563 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Col17a1Q07563 Gm37826-201ENSMUST00000195329 322 ntBASIC18.9■□□□□ 0.62
Col17a1Q07563 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC18.9■□□□□ 0.62
Col17a1Q07563 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col17a1Q07563 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC18.9■□□□□ 0.62
Col17a1Q07563 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Col17a1Q07563 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col17a1Q07563 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Col17a1Q07563 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC18.9■□□□□ 0.62
Col17a1Q07563 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col17a1Q07563 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col17a1Q07563 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC18.9■□□□□ 0.62
Col17a1Q07563 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Col17a1Q07563 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Col17a1Q07563 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Col17a1Q07563 AC158636.1-201ENSMUST00000220118 1393 ntBASIC18.9■□□□□ 0.62
Col17a1Q07563 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Col17a1Q07563 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col17a1Q07563 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col17a1Q07563 Gm10152-201ENSMUST00000193475 1344 ntBASIC18.9■□□□□ 0.62
Col17a1Q07563 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Col17a1Q07563 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Col17a1Q07563 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col17a1Q07563 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Col17a1Q07563 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col17a1Q07563 Gm44094-201ENSMUST00000204703 2030 ntBASIC18.9■□□□□ 0.62
Col17a1Q07563 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Col17a1Q07563 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC18.9■□□□□ 0.62
Col17a1Q07563 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Col17a1Q07563 Gm25569-201ENSMUST00000157175 131 ntBASIC18.9■□□□□ 0.62
Col17a1Q07563 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Col17a1Q07563 Gm6216-201ENSMUST00000182390 687 ntBASIC18.9■□□□□ 0.62
Col17a1Q07563 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Col17a1Q07563 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC18.9■□□□□ 0.62
Col17a1Q07563 AC113082.1-201ENSMUST00000217324 327 ntBASIC18.9■□□□□ 0.62
Col17a1Q07563 AC154305.4-201ENSMUST00000224520 614 ntBASIC18.9■□□□□ 0.62
Col17a1Q07563 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col17a1Q07563 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col17a1Q07563 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col17a1Q07563 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
Col17a1Q07563 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Col17a1Q07563 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Col17a1Q07563 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms