Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scn1bP97952 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scn1bP97952 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scn1bP97952 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scn1bP97952 Gm12585-201ENSMUST00000117307 290 ntBASIC11.53□□□□□ -0.56
Scn1bP97952 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.53□□□□□ -0.56
Scn1bP97952 Gm14767-201ENSMUST00000121559 586 ntBASIC11.53□□□□□ -0.56
Scn1bP97952 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC11.53□□□□□ -0.56
Scn1bP97952 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Scn1bP97952 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.53□□□□□ -0.56
Scn1bP97952 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC11.53□□□□□ -0.56
Scn1bP97952 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scn1bP97952 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC11.53□□□□□ -0.56
Scn1bP97952 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scn1bP97952 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scn1bP97952 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scn1bP97952 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Scn1bP97952 Cog3-203ENSMUST00000227473 4197 ntBASIC11.53□□□□□ -0.56
Scn1bP97952 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scn1bP97952 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Scn1bP97952 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.53□□□□□ -0.56
Scn1bP97952 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scn1bP97952 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scn1bP97952 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scn1bP97952 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.53□□□□□ -0.56
Scn1bP97952 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Scn1bP97952 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scn1bP97952 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Scn1bP97952 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scn1bP97952 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Scn1bP97952 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.53□□□□□ -0.56
Scn1bP97952 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.53□□□□□ -0.56
Scn1bP97952 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Scn1bP97952 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Scn1bP97952 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Scn1bP97952 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Scn1bP97952 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Scn1bP97952 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.52□□□□□ -0.56
Scn1bP97952 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Scn1bP97952 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Scn1bP97952 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Scn1bP97952 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Scn1bP97952 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Scn1bP97952 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.52□□□□□ -0.56
Scn1bP97952 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Scn1bP97952 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.52□□□□□ -0.57
Scn1bP97952 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scn1bP97952 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scn1bP97952 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Scn1bP97952 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.52□□□□□ -0.57
Scn1bP97952 Gm13616-201ENSMUST00000120600 222 ntBASIC11.52□□□□□ -0.57
Scn1bP97952 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC11.52□□□□□ -0.57
Scn1bP97952 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.52□□□□□ -0.57
Scn1bP97952 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.52□□□□□ -0.57
Scn1bP97952 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.52□□□□□ -0.57
Scn1bP97952 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.52□□□□□ -0.57
Scn1bP97952 Gm17330-201ENSMUST00000221047 165 ntBASIC11.52□□□□□ -0.57
Scn1bP97952 AC154846.1-201ENSMUST00000226278 862 ntBASIC11.52□□□□□ -0.57
Scn1bP97952 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scn1bP97952 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scn1bP97952 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Scn1bP97952 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Scn1bP97952 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.52□□□□□ -0.57
Scn1bP97952 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Scn1bP97952 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scn1bP97952 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scn1bP97952 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scn1bP97952 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Scn1bP97952 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Scn1bP97952 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.52□□□□□ -0.57
Scn1bP97952 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.52□□□□□ -0.57
Scn1bP97952 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scn1bP97952 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scn1bP97952 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scn1bP97952 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Scn1bP97952 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scn1bP97952 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Scn1bP97952 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scn1bP97952 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Scn1bP97952 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Scn1bP97952 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Scn1bP97952 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Scn1bP97952 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Scn1bP97952 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scn1bP97952 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scn1bP97952 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scn1bP97952 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Scn1bP97952 Gm3436-201ENSMUST00000179930 840 ntBASIC11.51□□□□□ -0.57
Scn1bP97952 Gm37171-201ENSMUST00000192636 1185 ntBASIC11.51□□□□□ -0.57
Scn1bP97952 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Scn1bP97952 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scn1bP97952 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Scn1bP97952 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scn1bP97952 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.51□□□□□ -0.57
Scn1bP97952 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scn1bP97952 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scn1bP97952 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scn1bP97952 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scn1bP97952 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scn1bP97952 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms