Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smn1P97801 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Smn1P97801 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smn1P97801 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smn1P97801 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Smn1P97801 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.8□□□□□ -0.68
Smn1P97801 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Smn1P97801 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Smn1P97801 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smn1P97801 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smn1P97801 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smn1P97801 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
Smn1P97801 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Smn1P97801 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Smn1P97801 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smn1P97801 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Smn1P97801 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smn1P97801 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smn1P97801 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smn1P97801 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.79□□□□□ -0.68
Smn1P97801 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smn1P97801 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Smn1P97801 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Smn1P97801 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Smn1P97801 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.79□□□□□ -0.68
Smn1P97801 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Smn1P97801 Map1b-203ENSMUST00000223725 2669 ntBASIC10.79□□□□□ -0.68
Smn1P97801 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smn1P97801 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smn1P97801 Gm12291-201ENSMUST00000121627 311 ntBASIC10.79□□□□□ -0.68
Smn1P97801 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Smn1P97801 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC10.79□□□□□ -0.68
Smn1P97801 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Smn1P97801 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
Smn1P97801 Gm44397-201ENSMUST00000195950 113 ntBASIC10.79□□□□□ -0.68
Smn1P97801 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Smn1P97801 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC10.79□□□□□ -0.68
Smn1P97801 Gm42929-201ENSMUST00000198374 1286 ntBASIC10.79□□□□□ -0.68
Smn1P97801 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC10.79□□□□□ -0.68
Smn1P97801 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC10.79□□□□□ -0.68
Smn1P97801 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smn1P97801 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Smn1P97801 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smn1P97801 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smn1P97801 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smn1P97801 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Smn1P97801 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Smn1P97801 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Smn1P97801 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Smn1P97801 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smn1P97801 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Smn1P97801 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Smn1P97801 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Smn1P97801 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smn1P97801 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
Smn1P97801 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Smn1P97801 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Smn1P97801 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smn1P97801 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smn1P97801 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Smn1P97801 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smn1P97801 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smn1P97801 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smn1P97801 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smn1P97801 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Smn1P97801 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smn1P97801 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC10.78□□□□□ -0.68
Smn1P97801 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Smn1P97801 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Smn1P97801 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smn1P97801 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Smn1P97801 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smn1P97801 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smn1P97801 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smn1P97801 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smn1P97801 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Smn1P97801 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smn1P97801 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Smn1P97801 Ldha-ps-201ENSMUST00000119390 995 ntBASIC10.78□□□□□ -0.68
Smn1P97801 Gm12341-201ENSMUST00000119724 503 ntBASIC10.78□□□□□ -0.68
Smn1P97801 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC10.78□□□□□ -0.68
Smn1P97801 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Smn1P97801 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smn1P97801 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smn1P97801 Gm18307-201ENSMUST00000206864 949 ntBASIC10.78□□□□□ -0.68
Smn1P97801 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC10.78□□□□□ -0.68
Smn1P97801 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
Smn1P97801 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smn1P97801 Mir339-201ENSMUST00000083659 96 ntBASIC10.78□□□□□ -0.68
Smn1P97801 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Smn1P97801 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Smn1P97801 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.78□□□□□ -0.68
Smn1P97801 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Smn1P97801 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Smn1P97801 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.78□□□□□ -0.68
Smn1P97801 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smn1P97801 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smn1P97801 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smn1P97801 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smn1P97801 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms