Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx3-2P97503 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.95□□□□□ -0.5
Nkx3-2P97503 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.95□□□□□ -0.5
Nkx3-2P97503 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Nkx3-2P97503 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx3-2P97503 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Nkx3-2P97503 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx3-2P97503 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx3-2P97503 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.95□□□□□ -0.5
Nkx3-2P97503 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx3-2P97503 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx3-2P97503 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx3-2P97503 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx3-2P97503 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx3-2P97503 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx3-2P97503 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.95□□□□□ -0.5
Nkx3-2P97503 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx3-2P97503 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx3-2P97503 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.95□□□□□ -0.5
Nkx3-2P97503 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx3-2P97503 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx3-2P97503 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx3-2P97503 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx3-2P97503 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Nkx3-2P97503 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.94□□□□□ -0.5
Nkx3-2P97503 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Nkx3-2P97503 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Nkx3-2P97503 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx3-2P97503 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx3-2P97503 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Nkx3-2P97503 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.94□□□□□ -0.5
Nkx3-2P97503 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx3-2P97503 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx3-2P97503 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx3-2P97503 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx3-2P97503 Gm13492-201ENSMUST00000119772 665 ntBASIC11.94□□□□□ -0.5
Nkx3-2P97503 Gm14704-201ENSMUST00000120300 874 ntBASIC11.94□□□□□ -0.5
Nkx3-2P97503 Gm13316-201ENSMUST00000140537 691 ntBASIC11.94□□□□□ -0.5
Nkx3-2P97503 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx3-2P97503 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx3-2P97503 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.94□□□□□ -0.5
Nkx3-2P97503 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.94□□□□□ -0.5
Nkx3-2P97503 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx3-2P97503 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Nkx3-2P97503 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx3-2P97503 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx3-2P97503 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.94□□□□□ -0.5
Nkx3-2P97503 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx3-2P97503 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx3-2P97503 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx3-2P97503 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx3-2P97503 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx3-2P97503 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx3-2P97503 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx3-2P97503 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx3-2P97503 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx3-2P97503 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx3-2P97503 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.94□□□□□ -0.5
Nkx3-2P97503 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Nkx3-2P97503 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Nkx3-2P97503 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx3-2P97503 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Nkx3-2P97503 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx3-2P97503 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx3-2P97503 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.94□□□□□ -0.5
Nkx3-2P97503 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.94□□□□□ -0.5
Nkx3-2P97503 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Nkx3-2P97503 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx3-2P97503 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx3-2P97503 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx3-2P97503 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Nkx3-2P97503 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx3-2P97503 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx3-2P97503 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx3-2P97503 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx3-2P97503 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.93□□□□□ -0.5
Nkx3-2P97503 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Nkx3-2P97503 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.93□□□□□ -0.5
Nkx3-2P97503 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx3-2P97503 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.93□□□□□ -0.5
Nkx3-2P97503 Gm2991-201ENSMUST00000173338 480 ntBASIC11.93□□□□□ -0.5
Nkx3-2P97503 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx3-2P97503 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.93□□□□□ -0.5
Nkx3-2P97503 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.93□□□□□ -0.5
Nkx3-2P97503 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx3-2P97503 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx3-2P97503 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx3-2P97503 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Nkx3-2P97503 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx3-2P97503 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.93□□□□□ -0.5
Nkx3-2P97503 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx3-2P97503 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx3-2P97503 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx3-2P97503 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx3-2P97503 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx3-2P97503 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx3-2P97503 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx3-2P97503 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx3-2P97503 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx3-2P97503 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms