Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lig3P97386 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lig3P97386 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lig3P97386 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lig3P97386 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lig3P97386 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.82□□□□□ -0.2
Lig3P97386 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lig3P97386 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Lig3P97386 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lig3P97386 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lig3P97386 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lig3P97386 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lig3P97386 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lig3P97386 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.81□□□□□ -0.2
Lig3P97386 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lig3P97386 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lig3P97386 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lig3P97386 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.81□□□□□ -0.2
Lig3P97386 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lig3P97386 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lig3P97386 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lig3P97386 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.81□□□□□ -0.2
Lig3P97386 Gm11222-201ENSMUST00000119005 738 ntBASIC13.81□□□□□ -0.2
Lig3P97386 Gm11591-201ENSMUST00000120063 702 ntBASIC13.81□□□□□ -0.2
Lig3P97386 Gm11964-201ENSMUST00000120982 444 ntBASIC13.81□□□□□ -0.2
Lig3P97386 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lig3P97386 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lig3P97386 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.81□□□□□ -0.2
Lig3P97386 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.81□□□□□ -0.2
Lig3P97386 Gm42997-202ENSMUST00000200321 985 ntBASIC13.81□□□□□ -0.2
Lig3P97386 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.81□□□□□ -0.2
Lig3P97386 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.81□□□□□ -0.2
Lig3P97386 Gm29787-201ENSMUST00000222129 849 ntBASIC13.81□□□□□ -0.2
Lig3P97386 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lig3P97386 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lig3P97386 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lig3P97386 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lig3P97386 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lig3P97386 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.81□□□□□ -0.2
Lig3P97386 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lig3P97386 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lig3P97386 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lig3P97386 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lig3P97386 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lig3P97386 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lig3P97386 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.81□□□□□ -0.2
Lig3P97386 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lig3P97386 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lig3P97386 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lig3P97386 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lig3P97386 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lig3P97386 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Lig3P97386 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Lig3P97386 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.8□□□□□ -0.2
Lig3P97386 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.8□□□□□ -0.2
Lig3P97386 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lig3P97386 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.8□□□□□ -0.2
Lig3P97386 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lig3P97386 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lig3P97386 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lig3P97386 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lig3P97386 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lig3P97386 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lig3P97386 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Lig3P97386 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lig3P97386 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lig3P97386 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Lig3P97386 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.8□□□□□ -0.2
Lig3P97386 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lig3P97386 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Lig3P97386 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Lig3P97386 Mir5120-201ENSMUST00000175020 78 ntBASIC13.8□□□□□ -0.2
Lig3P97386 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC13.8□□□□□ -0.2
Lig3P97386 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lig3P97386 Gm17330-201ENSMUST00000221047 165 ntBASIC13.8□□□□□ -0.2
Lig3P97386 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.8□□□□□ -0.2
Lig3P97386 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lig3P97386 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lig3P97386 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lig3P97386 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lig3P97386 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lig3P97386 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lig3P97386 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lig3P97386 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.8□□□□□ -0.2
Lig3P97386 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Lig3P97386 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13.8□□□□□ -0.2
Lig3P97386 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lig3P97386 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lig3P97386 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lig3P97386 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Lig3P97386 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.79□□□□□ -0.2
Lig3P97386 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Lig3P97386 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lig3P97386 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lig3P97386 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lig3P97386 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lig3P97386 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lig3P97386 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.79□□□□□ -0.2
Lig3P97386 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.79□□□□□ -0.2
Lig3P97386 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms