Protein–RNA interactions for Protein: P84228

Hist1h3b, Histone H3.2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3bP84228 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h3bP84228 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h3bP84228 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Hist1h3bP84228 Gm15703-201ENSMUST00000120250 880 ntBASIC11.1□□□□□ -0.63
Hist1h3bP84228 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h3bP84228 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Hist1h3bP84228 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h3bP84228 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h3bP84228 Gm27682-201ENSMUST00000183930 110 ntBASIC11.1□□□□□ -0.63
Hist1h3bP84228 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h3bP84228 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h3bP84228 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h3bP84228 AC140375.2-201ENSMUST00000225283 584 ntBASIC11.1□□□□□ -0.63
Hist1h3bP84228 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h3bP84228 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h3bP84228 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h3bP84228 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Hist1h3bP84228 Gm26035-201ENSMUST00000083065 308 ntBASIC11.1□□□□□ -0.63
Hist1h3bP84228 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h3bP84228 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h3bP84228 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h3bP84228 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.1□□□□□ -0.63
Hist1h3bP84228 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h3bP84228 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h3bP84228 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h3bP84228 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h3bP84228 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h3bP84228 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.1□□□□□ -0.63
Hist1h3bP84228 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h3bP84228 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Hist1h3bP84228 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h3bP84228 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h3bP84228 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h3bP84228 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.09□□□□□ -0.63
Hist1h3bP84228 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h3bP84228 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Gm12390-201ENSMUST00000117897 397 ntBASIC11.09□□□□□ -0.63
Hist1h3bP84228 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.09□□□□□ -0.63
Hist1h3bP84228 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.09□□□□□ -0.63
Hist1h3bP84228 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Hist1h3bP84228 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Gm38092-201ENSMUST00000195600 653 ntBASIC11.09□□□□□ -0.63
Hist1h3bP84228 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h3bP84228 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h3bP84228 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hist1h3bP84228 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h3bP84228 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h3bP84228 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h3bP84228 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h3bP84228 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h3bP84228 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h3bP84228 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h3bP84228 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h3bP84228 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h3bP84228 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Hist1h3bP84228 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h3bP84228 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.08□□□□□ -0.64
Hist1h3bP84228 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hist1h3bP84228 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms