Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
SgcaP82350 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Gm8617-201ENSMUST00000118796 2222 ntBASIC10.58□□□□□ -0.72
SgcaP82350 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
SgcaP82350 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
SgcaP82350 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
SgcaP82350 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC10.58□□□□□ -0.72
SgcaP82350 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.58□□□□□ -0.72
SgcaP82350 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.58□□□□□ -0.72
SgcaP82350 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
SgcaP82350 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC10.58□□□□□ -0.72
SgcaP82350 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.58□□□□□ -0.72
SgcaP82350 Gm12485-201ENSMUST00000119641 291 ntBASIC10.58□□□□□ -0.72
SgcaP82350 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC10.58□□□□□ -0.72
SgcaP82350 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Gm6736-201ENSMUST00000166583 948 ntBASIC10.58□□□□□ -0.72
SgcaP82350 Gm44124-201ENSMUST00000204159 472 ntBASIC10.58□□□□□ -0.72
SgcaP82350 AC132104.2-201ENSMUST00000215011 266 ntBASIC10.58□□□□□ -0.72
SgcaP82350 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
SgcaP82350 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.58□□□□□ -0.72
SgcaP82350 Gm43727-201ENSMUST00000198021 2647 ntBASIC10.58□□□□□ -0.72
SgcaP82350 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
SgcaP82350 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.58□□□□□ -0.72
SgcaP82350 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
SgcaP82350 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.58□□□□□ -0.72
SgcaP82350 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
SgcaP82350 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC10.58□□□□□ -0.72
SgcaP82350 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC10.58□□□□□ -0.72
SgcaP82350 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcaP82350 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
SgcaP82350 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC10.57□□□□□ -0.72
SgcaP82350 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SgcaP82350 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
SgcaP82350 Gm37849-201ENSMUST00000194722 1881 ntBASIC10.57□□□□□ -0.72
SgcaP82350 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
SgcaP82350 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SgcaP82350 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
SgcaP82350 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
SgcaP82350 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
SgcaP82350 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SgcaP82350 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SgcaP82350 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SgcaP82350 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SgcaP82350 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.57□□□□□ -0.72
SgcaP82350 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SgcaP82350 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SgcaP82350 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SgcaP82350 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC10.57□□□□□ -0.72
SgcaP82350 Cd63-ps-201ENSMUST00000145417 875 ntBASIC10.57□□□□□ -0.72
SgcaP82350 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC10.57□□□□□ -0.72
SgcaP82350 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SgcaP82350 Gm25144-201ENSMUST00000179561 110 ntBASIC10.57□□□□□ -0.72
SgcaP82350 Gm25352-201ENSMUST00000179815 110 ntBASIC10.57□□□□□ -0.72
SgcaP82350 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms