Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb1P70662 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb1P70662 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ldb1P70662 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb1P70662 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ldb1P70662 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb1P70662 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb1P70662 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.54□□□□□ -0.4
Ldb1P70662 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb1P70662 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.54□□□□□ -0.4
Ldb1P70662 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.54□□□□□ -0.4
Ldb1P70662 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb1P70662 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb1P70662 Gm13226-201ENSMUST00000117838 404 ntBASIC12.54□□□□□ -0.4
Ldb1P70662 Gm12384-201ENSMUST00000119228 919 ntBASIC12.54□□□□□ -0.4
Ldb1P70662 Gm15824-201ENSMUST00000119516 955 ntBASIC12.54□□□□□ -0.4
Ldb1P70662 Gm14660-201ENSMUST00000119809 575 ntBASIC12.54□□□□□ -0.4
Ldb1P70662 Gm11591-201ENSMUST00000120063 702 ntBASIC12.54□□□□□ -0.4
Ldb1P70662 Gm12502-201ENSMUST00000120197 444 ntBASIC12.54□□□□□ -0.4
Ldb1P70662 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb1P70662 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.54□□□□□ -0.4
Ldb1P70662 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ldb1P70662 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.54□□□□□ -0.4
Ldb1P70662 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.54□□□□□ -0.4
Ldb1P70662 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.54□□□□□ -0.4
Ldb1P70662 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.54□□□□□ -0.4
Ldb1P70662 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb1P70662 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.54□□□□□ -0.4
Ldb1P70662 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.54□□□□□ -0.4
Ldb1P70662 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.54□□□□□ -0.4
Ldb1P70662 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb1P70662 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ldb1P70662 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ldb1P70662 Gm26035-201ENSMUST00000083065 308 ntBASIC12.54□□□□□ -0.4
Ldb1P70662 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb1P70662 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb1P70662 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.54□□□□□ -0.4
Ldb1P70662 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb1P70662 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb1P70662 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb1P70662 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb1P70662 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb1P70662 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ldb1P70662 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb1P70662 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb1P70662 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
Ldb1P70662 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ldb1P70662 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ldb1P70662 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb1P70662 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb1P70662 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb1P70662 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ldb1P70662 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ldb1P70662 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb1P70662 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb1P70662 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ldb1P70662 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb1P70662 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb1P70662 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb1P70662 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
Ldb1P70662 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb1P70662 Gm25261-201ENSMUST00000157416 134 ntBASIC12.53□□□□□ -0.4
Ldb1P70662 Gm25927-201ENSMUST00000175058 117 ntBASIC12.53□□□□□ -0.4
Ldb1P70662 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb1P70662 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb1P70662 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb1P70662 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb1P70662 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ldb1P70662 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.53□□□□□ -0.4
Ldb1P70662 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb1P70662 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.53□□□□□ -0.4
Ldb1P70662 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.53□□□□□ -0.4
Ldb1P70662 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.53□□□□□ -0.4
Ldb1P70662 Matn2-203ENSMUST00000226766 3252 ntBASIC12.53□□□□□ -0.4
Ldb1P70662 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.53□□□□□ -0.4
Ldb1P70662 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb1P70662 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb1P70662 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb1P70662 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb1P70662 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb1P70662 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ldb1P70662 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ldb1P70662 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ldb1P70662 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ldb1P70662 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ldb1P70662 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ldb1P70662 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ldb1P70662 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.4
Ldb1P70662 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ldb1P70662 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ldb1P70662 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ldb1P70662 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ldb1P70662 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ldb1P70662 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ldb1P70662 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ldb1P70662 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.52□□□□□ -0.41
Ldb1P70662 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ldb1P70662 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Ldb1P70662 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.52□□□□□ -0.41
Ldb1P70662 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms