Protein–RNA interactions for Protein: P70658

Cxcr4, C-X-C chemokine receptor type 4, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr4P70658 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.84□□□□□ -0.51
Cxcr4P70658 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcr4P70658 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcr4P70658 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.84□□□□□ -0.51
Cxcr4P70658 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcr4P70658 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Cxcr4P70658 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcr4P70658 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Cxcr4P70658 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.84□□□□□ -0.51
Cxcr4P70658 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.84□□□□□ -0.51
Cxcr4P70658 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcr4P70658 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.84□□□□□ -0.51
Cxcr4P70658 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcr4P70658 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Cxcr4P70658 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcr4P70658 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcr4P70658 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Cxcr4P70658 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcr4P70658 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcr4P70658 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcr4P70658 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcr4P70658 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Cxcr4P70658 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
Cxcr4P70658 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Cxcr4P70658 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.83□□□□□ -0.52
Cxcr4P70658 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr4P70658 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr4P70658 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr4P70658 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr4P70658 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr4P70658 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr4P70658 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr4P70658 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.83□□□□□ -0.52
Cxcr4P70658 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Cxcr4P70658 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr4P70658 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Cxcr4P70658 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cxcr4P70658 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr4P70658 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Cxcr4P70658 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.83□□□□□ -0.52
Cxcr4P70658 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cxcr4P70658 Gm13813-201ENSMUST00000120998 787 ntBASIC11.83□□□□□ -0.52
Cxcr4P70658 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.83□□□□□ -0.52
Cxcr4P70658 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.83□□□□□ -0.52
Cxcr4P70658 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.83□□□□□ -0.52
Cxcr4P70658 Gm44124-201ENSMUST00000204159 472 ntBASIC11.83□□□□□ -0.52
Cxcr4P70658 Gm44069-201ENSMUST00000204898 506 ntBASIC11.83□□□□□ -0.52
Cxcr4P70658 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr4P70658 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.83□□□□□ -0.52
Cxcr4P70658 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr4P70658 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr4P70658 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr4P70658 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cxcr4P70658 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr4P70658 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr4P70658 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr4P70658 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cxcr4P70658 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.83□□□□□ -0.52
Cxcr4P70658 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr4P70658 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr4P70658 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr4P70658 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.83□□□□□ -0.52
Cxcr4P70658 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr4P70658 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr4P70658 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr4P70658 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr4P70658 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr4P70658 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr4P70658 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.83□□□□□ -0.52
Cxcr4P70658 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr4P70658 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr4P70658 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcr4P70658 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Cxcr4P70658 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcr4P70658 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcr4P70658 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcr4P70658 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cxcr4P70658 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Cxcr4P70658 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Cxcr4P70658 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cxcr4P70658 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcr4P70658 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcr4P70658 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.82□□□□□ -0.52
Cxcr4P70658 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcr4P70658 Gm13369-201ENSMUST00000119442 987 ntBASIC11.82□□□□□ -0.52
Cxcr4P70658 Gm16177-201ENSMUST00000120728 718 ntBASIC11.82□□□□□ -0.52
Cxcr4P70658 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcr4P70658 Gm37497-201ENSMUST00000195830 798 ntBASIC11.82□□□□□ -0.52
Cxcr4P70658 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcr4P70658 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.82□□□□□ -0.52
Cxcr4P70658 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.82□□□□□ -0.52
Cxcr4P70658 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.82□□□□□ -0.52
Cxcr4P70658 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.82□□□□□ -0.52
Cxcr4P70658 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcr4P70658 Rubie-203ENSMUST00000227803 2430 ntBASIC11.82□□□□□ -0.52
Cxcr4P70658 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcr4P70658 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.82□□□□□ -0.52
Cxcr4P70658 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.82□□□□□ -0.52
Cxcr4P70658 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcr4P70658 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms