Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msx3P70354 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msx3P70354 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msx3P70354 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Msx3P70354 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Msx3P70354 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.96□□□□□ -0.34
Msx3P70354 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Msx3P70354 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Msx3P70354 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Msx3P70354 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Msx3P70354 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Msx3P70354 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Msx3P70354 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Msx3P70354 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.95□□□□□ -0.34
Msx3P70354 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Msx3P70354 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Msx3P70354 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Msx3P70354 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Msx3P70354 Gm24231-201ENSMUST00000104315 133 ntBASIC12.95□□□□□ -0.34
Msx3P70354 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.95□□□□□ -0.34
Msx3P70354 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.95□□□□□ -0.34
Msx3P70354 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.95□□□□□ -0.34
Msx3P70354 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Msx3P70354 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.95□□□□□ -0.34
Msx3P70354 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.95□□□□□ -0.34
Msx3P70354 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Msx3P70354 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Msx3P70354 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Msx3P70354 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.95□□□□□ -0.34
Msx3P70354 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.95□□□□□ -0.34
Msx3P70354 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Msx3P70354 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Msx3P70354 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.95□□□□□ -0.34
Msx3P70354 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Msx3P70354 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Msx3P70354 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Msx3P70354 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Msx3P70354 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Msx3P70354 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Msx3P70354 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Msx3P70354 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Msx3P70354 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Msx3P70354 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Msx3P70354 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Msx3P70354 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Msx3P70354 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Msx3P70354 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Msx3P70354 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.94□□□□□ -0.34
Msx3P70354 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Msx3P70354 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Msx3P70354 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Msx3P70354 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.94□□□□□ -0.34
Msx3P70354 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Msx3P70354 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Msx3P70354 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Msx3P70354 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Msx3P70354 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
Msx3P70354 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Msx3P70354 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.94□□□□□ -0.34
Msx3P70354 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.94□□□□□ -0.34
Msx3P70354 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.94□□□□□ -0.34
Msx3P70354 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Msx3P70354 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Msx3P70354 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Msx3P70354 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Msx3P70354 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Msx3P70354 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Msx3P70354 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Msx3P70354 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.94□□□□□ -0.34
Msx3P70354 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Msx3P70354 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Msx3P70354 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Msx3P70354 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Msx3P70354 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Msx3P70354 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Msx3P70354 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Msx3P70354 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Msx3P70354 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Msx3P70354 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Msx3P70354 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.94□□□□□ -0.34
Msx3P70354 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Msx3P70354 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.94□□□□□ -0.34
Msx3P70354 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Msx3P70354 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Msx3P70354 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Msx3P70354 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Msx3P70354 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Msx3P70354 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Msx3P70354 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.94□□□□□ -0.34
Msx3P70354 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Msx3P70354 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Msx3P70354 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.93□□□□□ -0.34
Msx3P70354 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.93□□□□□ -0.34
Msx3P70354 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Msx3P70354 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Msx3P70354 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.93□□□□□ -0.34
Msx3P70354 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Msx3P70354 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Msx3P70354 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Msx3P70354 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms