Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ybx1P62960 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ybx1P62960 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Ybx1P62960 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ybx1P62960 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Ybx1P62960 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.91□□□□□ -0.34
Ybx1P62960 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.91□□□□□ -0.34
Ybx1P62960 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC12.91□□□□□ -0.34
Ybx1P62960 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.91□□□□□ -0.34
Ybx1P62960 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ybx1P62960 Gm28882-201ENSMUST00000185504 314 ntBASIC12.91□□□□□ -0.34
Ybx1P62960 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.91□□□□□ -0.34
Ybx1P62960 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Ybx1P62960 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ybx1P62960 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ybx1P62960 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ybx1P62960 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ybx1P62960 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ybx1P62960 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.91□□□□□ -0.34
Ybx1P62960 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ybx1P62960 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ybx1P62960 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Ybx1P62960 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ybx1P62960 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ybx1P62960 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.91□□□□□ -0.34
Ybx1P62960 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Ybx1P62960 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ybx1P62960 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ybx1P62960 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ybx1P62960 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Ybx1P62960 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ybx1P62960 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ybx1P62960 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ybx1P62960 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ybx1P62960 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ybx1P62960 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.9□□□□□ -0.34
Ybx1P62960 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.9□□□□□ -0.34
Ybx1P62960 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ybx1P62960 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ybx1P62960 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Ybx1P62960 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.9□□□□□ -0.34
Ybx1P62960 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ybx1P62960 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.9□□□□□ -0.34
Ybx1P62960 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC12.9□□□□□ -0.34
Ybx1P62960 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ybx1P62960 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.9□□□□□ -0.34
Ybx1P62960 Gm17812-201ENSMUST00000204935 318 ntBASIC12.9□□□□□ -0.34
Ybx1P62960 Gm29787-201ENSMUST00000222129 849 ntBASIC12.9□□□□□ -0.34
Ybx1P62960 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Ybx1P62960 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ybx1P62960 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Ybx1P62960 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ybx1P62960 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Ybx1P62960 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Ybx1P62960 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ybx1P62960 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ybx1P62960 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ybx1P62960 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ybx1P62960 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Ybx1P62960 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ybx1P62960 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ybx1P62960 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ybx1P62960 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.35
Ybx1P62960 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ybx1P62960 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ybx1P62960 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ybx1P62960 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ybx1P62960 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ybx1P62960 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ybx1P62960 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ybx1P62960 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Ybx1P62960 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ybx1P62960 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Ybx1P62960 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ybx1P62960 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ybx1P62960 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ybx1P62960 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ybx1P62960 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Ybx1P62960 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ybx1P62960 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ybx1P62960 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ybx1P62960 Gm12015-201ENSMUST00000117065 843 ntBASIC12.89□□□□□ -0.35
Ybx1P62960 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ybx1P62960 Gm23699-201ENSMUST00000158835 135 ntBASIC12.89□□□□□ -0.35
Ybx1P62960 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ybx1P62960 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.89□□□□□ -0.35
Ybx1P62960 Gm43378-201ENSMUST00000199336 582 ntBASIC12.89□□□□□ -0.35
Ybx1P62960 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.89□□□□□ -0.35
Ybx1P62960 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.89□□□□□ -0.35
Ybx1P62960 CT009718.3-201ENSMUST00000221116 367 ntBASIC12.89□□□□□ -0.35
Ybx1P62960 Gm14267-206ENSMUST00000226870 1209 ntBASIC12.89□□□□□ -0.35
Ybx1P62960 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ybx1P62960 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.89□□□□□ -0.35
Ybx1P62960 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ybx1P62960 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ybx1P62960 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ybx1P62960 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ybx1P62960 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ybx1P62960 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ybx1P62960 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms