Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps33bP59016 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps33bP59016 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps33bP59016 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vps33bP59016 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps33bP59016 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC15.73■□□□□ 0.11
Vps33bP59016 Gm12579-201ENSMUST00000118040 783 ntBASIC15.73■□□□□ 0.11
Vps33bP59016 Gm11836-201ENSMUST00000121022 441 ntBASIC15.73■□□□□ 0.11
Vps33bP59016 Gm11980-201ENSMUST00000121445 986 ntBASIC15.73■□□□□ 0.11
Vps33bP59016 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC15.73■□□□□ 0.11
Vps33bP59016 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC15.73■□□□□ 0.11
Vps33bP59016 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vps33bP59016 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
Vps33bP59016 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vps33bP59016 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
Vps33bP59016 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps33bP59016 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps33bP59016 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC15.73■□□□□ 0.11
Vps33bP59016 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps33bP59016 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vps33bP59016 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Vps33bP59016 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Vps33bP59016 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps33bP59016 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Vps33bP59016 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps33bP59016 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps33bP59016 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps33bP59016 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vps33bP59016 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps33bP59016 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC15.72■□□□□ 0.11
Vps33bP59016 Gm20392-201ENSMUST00000173047 701 ntBASIC15.72■□□□□ 0.11
Vps33bP59016 Gm45120-201ENSMUST00000208880 408 ntBASIC15.72■□□□□ 0.11
Vps33bP59016 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps33bP59016 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps33bP59016 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps33bP59016 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC15.72■□□□□ 0.11
Vps33bP59016 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Vps33bP59016 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps33bP59016 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vps33bP59016 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps33bP59016 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps33bP59016 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps33bP59016 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps33bP59016 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vps33bP59016 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Vps33bP59016 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vps33bP59016 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vps33bP59016 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Vps33bP59016 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps33bP59016 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps33bP59016 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Vps33bP59016 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vps33bP59016 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps33bP59016 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps33bP59016 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.71■□□□□ 0.11
Vps33bP59016 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps33bP59016 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vps33bP59016 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps33bP59016 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.71■□□□□ 0.11
Vps33bP59016 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vps33bP59016 Gm37859-201ENSMUST00000195529 2173 ntBASIC15.71■□□□□ 0.11
Vps33bP59016 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps33bP59016 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps33bP59016 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC15.71■□□□□ 0.11
Vps33bP59016 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC15.71■□□□□ 0.11
Vps33bP59016 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC15.71■□□□□ 0.11
Vps33bP59016 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC15.71■□□□□ 0.11
Vps33bP59016 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC15.71■□□□□ 0.11
Vps33bP59016 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC15.71■□□□□ 0.11
Vps33bP59016 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps33bP59016 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Vps33bP59016 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Vps33bP59016 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vps33bP59016 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC15.71■□□□□ 0.11
Vps33bP59016 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vps33bP59016 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps33bP59016 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps33bP59016 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Vps33bP59016 Gm43045-201ENSMUST00000198725 2095 ntBASIC15.71■□□□□ 0.1
Vps33bP59016 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Vps33bP59016 Gm11405-201ENSMUST00000118689 1556 ntBASIC15.7■□□□□ 0.1
Vps33bP59016 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps33bP59016 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps33bP59016 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC15.7■□□□□ 0.1
Vps33bP59016 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps33bP59016 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Vps33bP59016 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps33bP59016 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC15.7■□□□□ 0.1
Vps33bP59016 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC15.7■□□□□ 0.1
Vps33bP59016 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vps33bP59016 Gm5100-201ENSMUST00000195631 589 ntBASIC15.7■□□□□ 0.1
Vps33bP59016 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vps33bP59016 Gm44506-201ENSMUST00000206278 965 ntBASIC15.7■□□□□ 0.1
Vps33bP59016 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC15.7■□□□□ 0.1
Vps33bP59016 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC15.7■□□□□ 0.1
Vps33bP59016 AC113082.1-201ENSMUST00000217324 327 ntBASIC15.7■□□□□ 0.1
Vps33bP59016 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC15.7■□□□□ 0.1
Vps33bP59016 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps33bP59016 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps33bP59016 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms