Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tpm1P58771 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tpm1P58771 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tpm1P58771 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Tpm1P58771 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Tpm1P58771 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tpm1P58771 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Tpm1P58771 Gm11978-201ENSMUST00000122315 466 ntBASIC14.06□□□□□ -0.16
Tpm1P58771 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.06□□□□□ -0.16
Tpm1P58771 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Tpm1P58771 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.06□□□□□ -0.16
Tpm1P58771 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.06□□□□□ -0.16
Tpm1P58771 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Tpm1P58771 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tpm1P58771 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tpm1P58771 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tpm1P58771 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tpm1P58771 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tpm1P58771 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Tpm1P58771 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Tpm1P58771 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tpm1P58771 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tpm1P58771 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.06□□□□□ -0.16
Tpm1P58771 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.06□□□□□ -0.16
Tpm1P58771 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tpm1P58771 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tpm1P58771 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Tpm1P58771 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Tpm1P58771 Arhgef3-204ENSMUST00000225949 3198 ntBASIC14.06□□□□□ -0.16
Tpm1P58771 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm1P58771 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm1P58771 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC14.05□□□□□ -0.16
Tpm1P58771 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Tpm1P58771 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm1P58771 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm1P58771 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm1P58771 Gm5053-201ENSMUST00000208361 1678 ntBASIC14.05□□□□□ -0.16
Tpm1P58771 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm1P58771 Gm18983-201ENSMUST00000222884 2729 ntBASIC14.05□□□□□ -0.16
Tpm1P58771 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm1P58771 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Tpm1P58771 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Tpm1P58771 Gm13813-201ENSMUST00000120998 787 ntBASIC14.05□□□□□ -0.16
Tpm1P58771 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.05□□□□□ -0.16
Tpm1P58771 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm1P58771 Mir7684-201ENSMUST00000183858 60 ntBASIC14.05□□□□□ -0.16
Tpm1P58771 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.05□□□□□ -0.16
Tpm1P58771 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Tpm1P58771 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.05□□□□□ -0.16
Tpm1P58771 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.05□□□□□ -0.16
Tpm1P58771 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC14.05□□□□□ -0.16
Tpm1P58771 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm1P58771 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm1P58771 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm1P58771 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Tpm1P58771 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm1P58771 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm1P58771 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm1P58771 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm1P58771 Gm43174-201ENSMUST00000195914 2445 ntBASIC14.05□□□□□ -0.16
Tpm1P58771 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm1P58771 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm1P58771 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm1P58771 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Tpm1P58771 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm1P58771 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC14.05□□□□□ -0.16
Tpm1P58771 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Tpm1P58771 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Tpm1P58771 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm1P58771 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm1P58771 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm1P58771 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm1P58771 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm1P58771 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm1P58771 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Tpm1P58771 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm1P58771 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm1P58771 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm1P58771 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm1P58771 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
Tpm1P58771 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Tpm1P58771 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm1P58771 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm1P58771 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm1P58771 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm1P58771 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm1P58771 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Tpm1P58771 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm1P58771 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.04□□□□□ -0.16
Tpm1P58771 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm1P58771 Mir8102-201ENSMUST00000184148 139 ntBASIC14.04□□□□□ -0.16
Tpm1P58771 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.04□□□□□ -0.16
Tpm1P58771 Gm37935-201ENSMUST00000192012 982 ntBASIC14.04□□□□□ -0.16
Tpm1P58771 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.04□□□□□ -0.16
Tpm1P58771 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.04□□□□□ -0.16
Tpm1P58771 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm1P58771 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm1P58771 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm1P58771 Gm16372-201ENSMUST00000073088 450 ntBASIC14.04□□□□□ -0.16
Tpm1P58771 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms