Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ctdsp1P58466 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC9.81□□□□□ -0.84
Ctdsp1P58466 Gm37422-201ENSMUST00000193794 4718 ntBASIC9.81□□□□□ -0.84
Ctdsp1P58466 AC131586.1-201ENSMUST00000228844 2964 ntBASIC9.81□□□□□ -0.84
Ctdsp1P58466 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ctdsp1P58466 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ctdsp1P58466 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ctdsp1P58466 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ctdsp1P58466 Gm43858-201ENSMUST00000199418 1778 ntBASIC9.8□□□□□ -0.84
Ctdsp1P58466 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ctdsp1P58466 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ctdsp1P58466 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ctdsp1P58466 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ctdsp1P58466 Gm37057-201ENSMUST00000192624 1916 ntBASIC9.8□□□□□ -0.84
Ctdsp1P58466 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ctdsp1P58466 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ctdsp1P58466 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ctdsp1P58466 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ctdsp1P58466 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ctdsp1P58466 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC9.8□□□□□ -0.84
Ctdsp1P58466 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ctdsp1P58466 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ctdsp1P58466 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC9.8□□□□□ -0.84
Ctdsp1P58466 Gm7153-201ENSMUST00000117092 455 ntBASIC9.8□□□□□ -0.84
Ctdsp1P58466 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC9.8□□□□□ -0.84
Ctdsp1P58466 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ctdsp1P58466 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC9.8□□□□□ -0.84
Ctdsp1P58466 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ctdsp1P58466 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC9.8□□□□□ -0.84
Ctdsp1P58466 Gm4804-201ENSMUST00000182234 999 ntBASIC9.8□□□□□ -0.84
Ctdsp1P58466 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ctdsp1P58466 AC134335.2-201ENSMUST00000227660 440 ntBASIC9.8□□□□□ -0.84
Ctdsp1P58466 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ctdsp1P58466 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ctdsp1P58466 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ctdsp1P58466 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC9.8□□□□□ -0.84
Ctdsp1P58466 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ctdsp1P58466 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ctdsp1P58466 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ctdsp1P58466 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ctdsp1P58466 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Ctdsp1P58466 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ctdsp1P58466 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ctdsp1P58466 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Ctdsp1P58466 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ctdsp1P58466 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC9.8□□□□□ -0.84
Ctdsp1P58466 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ctdsp1P58466 Gm42141-201ENSMUST00000196534 2172 ntBASIC9.8□□□□□ -0.84
Ctdsp1P58466 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ctdsp1P58466 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ctdsp1P58466 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ctdsp1P58466 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ctdsp1P58466 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ctdsp1P58466 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC9.79□□□□□ -0.84
Ctdsp1P58466 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC9.79□□□□□ -0.84
Ctdsp1P58466 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ctdsp1P58466 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Ctdsp1P58466 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
Ctdsp1P58466 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ctdsp1P58466 Gm43963-201ENSMUST00000203466 2488 ntBASIC9.79□□□□□ -0.84
Ctdsp1P58466 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC9.79□□□□□ -0.84
Ctdsp1P58466 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC9.79□□□□□ -0.84
Ctdsp1P58466 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ctdsp1P58466 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Ctdsp1P58466 Gm38292-201ENSMUST00000192646 3045 ntBASIC9.79□□□□□ -0.84
Ctdsp1P58466 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ctdsp1P58466 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ctdsp1P58466 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ctdsp1P58466 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ctdsp1P58466 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ctdsp1P58466 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC9.79□□□□□ -0.84
Ctdsp1P58466 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC9.79□□□□□ -0.84
Ctdsp1P58466 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC9.79□□□□□ -0.84
Ctdsp1P58466 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Ctdsp1P58466 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Ctdsp1P58466 Gm13813-201ENSMUST00000120998 787 ntBASIC9.79□□□□□ -0.84
Ctdsp1P58466 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ctdsp1P58466 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ctdsp1P58466 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ctdsp1P58466 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ctdsp1P58466 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ctdsp1P58466 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Ctdsp1P58466 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Ctdsp1P58466 Gm10576-201ENSMUST00000191927 825 ntBASIC9.79□□□□□ -0.84
Ctdsp1P58466 Gm33320-201ENSMUST00000192232 530 ntBASIC9.79□□□□□ -0.84
Ctdsp1P58466 Gm5425-201ENSMUST00000214125 459 ntBASIC9.79□□□□□ -0.84
Ctdsp1P58466 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Ctdsp1P58466 AC132317.1-201ENSMUST00000227227 962 ntBASIC9.79□□□□□ -0.84
Ctdsp1P58466 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ctdsp1P58466 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ctdsp1P58466 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ctdsp1P58466 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ctdsp1P58466 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Ctdsp1P58466 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ctdsp1P58466 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ctdsp1P58466 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ctdsp1P58466 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ctdsp1P58466 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ctdsp1P58466 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ctdsp1P58466 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms