Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh11P55288 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh11P55288 Gm12957-201ENSMUST00000117835 377 ntBASIC11.52□□□□□ -0.57
Cdh11P55288 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Cdh11P55288 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.52□□□□□ -0.57
Cdh11P55288 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.52□□□□□ -0.57
Cdh11P55288 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.52□□□□□ -0.57
Cdh11P55288 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh11P55288 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh11P55288 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.52□□□□□ -0.57
Cdh11P55288 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.52□□□□□ -0.57
Cdh11P55288 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.52□□□□□ -0.57
Cdh11P55288 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.52□□□□□ -0.57
Cdh11P55288 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.52□□□□□ -0.57
Cdh11P55288 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh11P55288 Itm2b-204ENSMUST00000228637 783 ntBASIC11.52□□□□□ -0.57
Cdh11P55288 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh11P55288 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh11P55288 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh11P55288 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.52□□□□□ -0.57
Cdh11P55288 Gm26315-201ENSMUST00000083890 321 ntBASIC11.52□□□□□ -0.57
Cdh11P55288 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh11P55288 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh11P55288 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.52□□□□□ -0.57
Cdh11P55288 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh11P55288 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.52□□□□□ -0.57
Cdh11P55288 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh11P55288 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh11P55288 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh11P55288 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Cdh11P55288 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh11P55288 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.52□□□□□ -0.57
Cdh11P55288 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh11P55288 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.51□□□□□ -0.57
Cdh11P55288 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Cdh11P55288 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.51□□□□□ -0.57
Cdh11P55288 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh11P55288 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh11P55288 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Cdh11P55288 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.51□□□□□ -0.57
Cdh11P55288 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh11P55288 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Cdh11P55288 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh11P55288 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh11P55288 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.51□□□□□ -0.57
Cdh11P55288 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh11P55288 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh11P55288 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh11P55288 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh11P55288 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Cdh11P55288 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh11P55288 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.51□□□□□ -0.57
Cdh11P55288 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh11P55288 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh11P55288 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Cdh11P55288 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.51□□□□□ -0.57
Cdh11P55288 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.51□□□□□ -0.57
Cdh11P55288 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh11P55288 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.51□□□□□ -0.57
Cdh11P55288 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh11P55288 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh11P55288 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh11P55288 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh11P55288 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh11P55288 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh11P55288 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh11P55288 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh11P55288 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh11P55288 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh11P55288 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh11P55288 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh11P55288 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.5□□□□□ -0.57
Cdh11P55288 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh11P55288 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh11P55288 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.5□□□□□ -0.57
Cdh11P55288 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.5□□□□□ -0.57
Cdh11P55288 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh11P55288 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh11P55288 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh11P55288 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh11P55288 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh11P55288 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Cdh11P55288 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh11P55288 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh11P55288 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh11P55288 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.5□□□□□ -0.57
Cdh11P55288 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh11P55288 Gm14660-201ENSMUST00000119809 575 ntBASIC11.5□□□□□ -0.57
Cdh11P55288 Gm11803-201ENSMUST00000119966 444 ntBASIC11.5□□□□□ -0.57
Cdh11P55288 Snora78-201ENSMUST00000158630 128 ntBASIC11.5□□□□□ -0.57
Cdh11P55288 Gm27731-201ENSMUST00000185192 107 ntBASIC11.5□□□□□ -0.57
Cdh11P55288 Gm43630-201ENSMUST00000201550 776 ntBASIC11.5□□□□□ -0.57
Cdh11P55288 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.5□□□□□ -0.57
Cdh11P55288 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh11P55288 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh11P55288 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh11P55288 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh11P55288 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh11P55288 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh11P55288 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms