Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Nub1P54729 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nub1P54729 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.61□□□□□ -0.23
Nub1P54729 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nub1P54729 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nub1P54729 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Nub1P54729 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nub1P54729 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nub1P54729 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Nub1P54729 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nub1P54729 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nub1P54729 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nub1P54729 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nub1P54729 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nub1P54729 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nub1P54729 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nub1P54729 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nub1P54729 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Nub1P54729 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.61□□□□□ -0.23
Nub1P54729 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nub1P54729 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nub1P54729 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.61□□□□□ -0.23
Nub1P54729 Gm8062-201ENSMUST00000139696 444 ntBASIC13.61□□□□□ -0.23
Nub1P54729 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Nub1P54729 Gm18584-201ENSMUST00000203098 964 ntBASIC13.61□□□□□ -0.23
Nub1P54729 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.61□□□□□ -0.23
Nub1P54729 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nub1P54729 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.61□□□□□ -0.23
Nub1P54729 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.61□□□□□ -0.23
Nub1P54729 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nub1P54729 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nub1P54729 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nub1P54729 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nub1P54729 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nub1P54729 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nub1P54729 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nub1P54729 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nub1P54729 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Nub1P54729 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nub1P54729 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nub1P54729 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nub1P54729 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nub1P54729 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nub1P54729 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Nub1P54729 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nub1P54729 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nub1P54729 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nub1P54729 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nub1P54729 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Nub1P54729 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nub1P54729 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nub1P54729 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Nub1P54729 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.6□□□□□ -0.23
Nub1P54729 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nub1P54729 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Nub1P54729 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13.6□□□□□ -0.23
Nub1P54729 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Nub1P54729 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nub1P54729 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nub1P54729 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.6□□□□□ -0.23
Nub1P54729 Gm12502-201ENSMUST00000120197 444 ntBASIC13.6□□□□□ -0.23
Nub1P54729 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nub1P54729 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nub1P54729 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.6□□□□□ -0.23
Nub1P54729 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Nub1P54729 Gm16379-201ENSMUST00000161469 348 ntBASIC13.6□□□□□ -0.23
Nub1P54729 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nub1P54729 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Nub1P54729 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.6□□□□□ -0.23
Nub1P54729 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.6□□□□□ -0.23
Nub1P54729 Gm8762-201ENSMUST00000193486 339 ntBASIC13.6□□□□□ -0.23
Nub1P54729 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nub1P54729 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nub1P54729 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nub1P54729 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Nub1P54729 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nub1P54729 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nub1P54729 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Nub1P54729 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nub1P54729 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Nub1P54729 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nub1P54729 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nub1P54729 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nub1P54729 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nub1P54729 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Nub1P54729 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Nub1P54729 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nub1P54729 AC129336.1-201ENSMUST00000220224 2277 ntBASIC13.6□□□□□ -0.23
Nub1P54729 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nub1P54729 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nub1P54729 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Nub1P54729 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nub1P54729 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.59□□□□□ -0.23
Nub1P54729 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Nub1P54729 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.59□□□□□ -0.23
Nub1P54729 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nub1P54729 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nub1P54729 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Nub1P54729 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.59□□□□□ -0.23
Nub1P54729 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms