Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Fdft1P53798 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.61□□□□□ -0.39
Fdft1P53798 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Fdft1P53798 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Fdft1P53798 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Fdft1P53798 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.61□□□□□ -0.39
Fdft1P53798 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Fdft1P53798 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.61□□□□□ -0.39
Fdft1P53798 Gm14704-201ENSMUST00000120300 874 ntBASIC12.61□□□□□ -0.39
Fdft1P53798 Gm13813-201ENSMUST00000120998 787 ntBASIC12.61□□□□□ -0.39
Fdft1P53798 Gm11424-201ENSMUST00000121929 829 ntBASIC12.61□□□□□ -0.39
Fdft1P53798 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Fdft1P53798 Gm24644-201ENSMUST00000157114 139 ntBASIC12.61□□□□□ -0.39
Fdft1P53798 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Fdft1P53798 Gm27331-201ENSMUST00000183705 60 ntBASIC12.61□□□□□ -0.39
Fdft1P53798 Gm29705-201ENSMUST00000212598 474 ntBASIC12.61□□□□□ -0.39
Fdft1P53798 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.61□□□□□ -0.39
Fdft1P53798 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Fdft1P53798 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Fdft1P53798 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Fdft1P53798 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.61□□□□□ -0.39
Fdft1P53798 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Fdft1P53798 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Fdft1P53798 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Fdft1P53798 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Fdft1P53798 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.61□□□□□ -0.39
Fdft1P53798 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Fdft1P53798 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Fdft1P53798 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Fdft1P53798 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Fdft1P53798 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Fdft1P53798 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Fdft1P53798 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Fdft1P53798 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.6□□□□□ -0.39
Fdft1P53798 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Fdft1P53798 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Fdft1P53798 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fdft1P53798 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Fdft1P53798 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fdft1P53798 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.6□□□□□ -0.39
Fdft1P53798 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fdft1P53798 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Fdft1P53798 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fdft1P53798 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fdft1P53798 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fdft1P53798 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fdft1P53798 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fdft1P53798 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.6□□□□□ -0.39
Fdft1P53798 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.6□□□□□ -0.39
Fdft1P53798 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.6□□□□□ -0.39
Fdft1P53798 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Fdft1P53798 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.6□□□□□ -0.39
Fdft1P53798 Gm17208-201ENSMUST00000168388 535 ntBASIC12.6□□□□□ -0.39
Fdft1P53798 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.6□□□□□ -0.39
Fdft1P53798 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.6□□□□□ -0.39
Fdft1P53798 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.6□□□□□ -0.39
Fdft1P53798 Gm7561-201ENSMUST00000211203 886 ntBASIC12.6□□□□□ -0.39
Fdft1P53798 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fdft1P53798 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.6□□□□□ -0.39
Fdft1P53798 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fdft1P53798 Gm6091-201ENSMUST00000098307 165 ntBASIC12.6□□□□□ -0.39
Fdft1P53798 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Fdft1P53798 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fdft1P53798 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.6□□□□□ -0.39
Fdft1P53798 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Fdft1P53798 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fdft1P53798 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fdft1P53798 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Fdft1P53798 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Fdft1P53798 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fdft1P53798 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fdft1P53798 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.6□□□□□ -0.39
Fdft1P53798 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.6□□□□□ -0.39
Fdft1P53798 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fdft1P53798 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fdft1P53798 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.6□□□□□ -0.39
Fdft1P53798 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fdft1P53798 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fdft1P53798 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fdft1P53798 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.59□□□□□ -0.39
Fdft1P53798 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fdft1P53798 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Fdft1P53798 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fdft1P53798 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fdft1P53798 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.59□□□□□ -0.39
Fdft1P53798 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fdft1P53798 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Fdft1P53798 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Fdft1P53798 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Fdft1P53798 Daam2-202ENSMUST00000224595 1926 ntBASIC12.59□□□□□ -0.39
Fdft1P53798 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fdft1P53798 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fdft1P53798 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fdft1P53798 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fdft1P53798 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fdft1P53798 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fdft1P53798 Gm11637-201ENSMUST00000120601 592 ntBASIC12.59□□□□□ -0.39
Fdft1P53798 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fdft1P53798 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.59□□□□□ -0.39
Fdft1P53798 Gm29649-201ENSMUST00000185649 419 ntBASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms