Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.72□□□□□ -0.69
Hmga2P52927 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmga2P52927 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmga2P52927 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hmga2P52927 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Hmga2P52927 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmga2P52927 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC10.72□□□□□ -0.69
Hmga2P52927 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Hmga2P52927 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmga2P52927 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Hmga2P52927 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Hmga2P52927 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Hmga2P52927 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmga2P52927 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmga2P52927 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC10.72□□□□□ -0.69
Hmga2P52927 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC10.72□□□□□ -0.69
Hmga2P52927 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hmga2P52927 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
Hmga2P52927 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.72□□□□□ -0.69
Hmga2P52927 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmga2P52927 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmga2P52927 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmga2P52927 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmga2P52927 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hmga2P52927 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hmga2P52927 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hmga2P52927 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Hmga2P52927 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hmga2P52927 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Hmga2P52927 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC10.71□□□□□ -0.69
Hmga2P52927 Gm14719-201ENSMUST00000121891 340 ntBASIC10.71□□□□□ -0.69
Hmga2P52927 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Hmga2P52927 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hmga2P52927 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Hmga2P52927 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC10.71□□□□□ -0.69
Hmga2P52927 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Hmga2P52927 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hmga2P52927 Mir7684-201ENSMUST00000183858 60 ntBASIC10.71□□□□□ -0.69
Hmga2P52927 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.71□□□□□ -0.69
Hmga2P52927 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Hmga2P52927 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Hmga2P52927 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hmga2P52927 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hmga2P52927 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hmga2P52927 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hmga2P52927 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hmga2P52927 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hmga2P52927 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hmga2P52927 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.71□□□□□ -0.7
Hmga2P52927 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Hmga2P52927 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Hmga2P52927 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Hmga2P52927 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.7
Hmga2P52927 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.71□□□□□ -0.7
Hmga2P52927 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Hmga2P52927 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Hmga2P52927 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
Hmga2P52927 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.7□□□□□ -0.7
Hmga2P52927 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hmga2P52927 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hmga2P52927 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Hmga2P52927 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Hmga2P52927 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Hmga2P52927 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hmga2P52927 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hmga2P52927 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.7□□□□□ -0.7
Hmga2P52927 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hmga2P52927 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Hmga2P52927 Gm24231-201ENSMUST00000104315 133 ntBASIC10.7□□□□□ -0.7
Hmga2P52927 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Hmga2P52927 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hmga2P52927 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Hmga2P52927 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC10.7□□□□□ -0.7
Hmga2P52927 Gm7558-201ENSMUST00000193221 1165 ntBASIC10.7□□□□□ -0.7
Hmga2P52927 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC10.7□□□□□ -0.7
Hmga2P52927 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.7□□□□□ -0.7
Hmga2P52927 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hmga2P52927 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hmga2P52927 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hmga2P52927 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hmga2P52927 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Hmga2P52927 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC10.7□□□□□ -0.7
Hmga2P52927 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hmga2P52927 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hmga2P52927 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hmga2P52927 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Hmga2P52927 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.7□□□□□ -0.7
Hmga2P52927 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hmga2P52927 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hmga2P52927 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hmga2P52927 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hmga2P52927 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Hmga2P52927 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hmga2P52927 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hmga2P52927 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hmga2P52927 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Hmga2P52927 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hmga2P52927 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hmga2P52927 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Hmga2P52927 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms