Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc3P49135 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc3P49135 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc3P49135 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc3P49135 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.97□□□□□ -0.01
Ercc3P49135 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc3P49135 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc3P49135 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Ercc3P49135 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.97□□□□□ -0.01
Ercc3P49135 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc3P49135 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Ercc3P49135 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Ercc3P49135 Gm37324-201ENSMUST00000194500 4504 ntBASIC14.97□□□□□ -0.01
Ercc3P49135 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.97□□□□□ -0.01
Ercc3P49135 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Ercc3P49135 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
Ercc3P49135 Gm5638-201ENSMUST00000118618 1258 ntBASIC14.97□□□□□ -0.01
Ercc3P49135 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc3P49135 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14.97□□□□□ -0.01
Ercc3P49135 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC14.97□□□□□ -0.01
Ercc3P49135 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.97□□□□□ -0.01
Ercc3P49135 Gm29396-201ENSMUST00000185659 716 ntBASIC14.97□□□□□ -0.01
Ercc3P49135 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC14.97□□□□□ -0.01
Ercc3P49135 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC14.97□□□□□ -0.01
Ercc3P49135 Gm18935-201ENSMUST00000212692 664 ntBASIC14.97□□□□□ -0.01
Ercc3P49135 AC132384.14-201ENSMUST00000219346 1147 ntBASIC14.97□□□□□ -0.01
Ercc3P49135 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc3P49135 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc3P49135 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Ercc3P49135 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc3P49135 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc3P49135 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc3P49135 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc3P49135 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc3P49135 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc3P49135 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC14.97□□□□□ -0.01
Ercc3P49135 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc3P49135 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.97□□□□□ -0.01
Ercc3P49135 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc3P49135 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc3P49135 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc3P49135 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc3P49135 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc3P49135 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Ercc3P49135 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc3P49135 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc3P49135 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc3P49135 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc3P49135 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc3P49135 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc3P49135 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc3P49135 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Ercc3P49135 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc3P49135 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc3P49135 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc3P49135 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc3P49135 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Ercc3P49135 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc3P49135 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc3P49135 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc3P49135 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc3P49135 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC14.96□□□□□ -0.01
Ercc3P49135 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.96□□□□□ -0.01
Ercc3P49135 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc3P49135 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC14.96□□□□□ -0.01
Ercc3P49135 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc3P49135 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC14.96□□□□□ -0.01
Ercc3P49135 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Ercc3P49135 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC14.96□□□□□ -0.01
Ercc3P49135 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.96□□□□□ -0.01
Ercc3P49135 Gm8176-201ENSMUST00000191297 1099 ntBASIC14.96□□□□□ -0.01
Ercc3P49135 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc3P49135 Gm8227-201ENSMUST00000223306 571 ntBASIC14.96□□□□□ -0.01
Ercc3P49135 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc3P49135 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc3P49135 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC14.96□□□□□ -0.01
Ercc3P49135 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc3P49135 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.96□□□□□ -0.01
Ercc3P49135 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc3P49135 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc3P49135 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC14.96□□□□□ -0.01
Ercc3P49135 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ercc3P49135 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ercc3P49135 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC14.96□□□□□ -0.02
Ercc3P49135 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ercc3P49135 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ercc3P49135 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ercc3P49135 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Ercc3P49135 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ercc3P49135 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ercc3P49135 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ercc3P49135 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ercc3P49135 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ercc3P49135 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ercc3P49135 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ercc3P49135 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ercc3P49135 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ercc3P49135 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ercc3P49135 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ercc3P49135 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms