Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC13.19□□□□□ -0.3
LmnaP48678 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.19□□□□□ -0.3
LmnaP48678 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.19□□□□□ -0.3
LmnaP48678 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.19□□□□□ -0.3
LmnaP48678 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LmnaP48678 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LmnaP48678 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
LmnaP48678 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LmnaP48678 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.19□□□□□ -0.3
LmnaP48678 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LmnaP48678 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LmnaP48678 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
LmnaP48678 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.19□□□□□ -0.3
LmnaP48678 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LmnaP48678 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LmnaP48678 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
LmnaP48678 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LmnaP48678 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.19□□□□□ -0.3
LmnaP48678 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LmnaP48678 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
LmnaP48678 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
LmnaP48678 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LmnaP48678 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LmnaP48678 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LmnaP48678 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LmnaP48678 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LmnaP48678 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LmnaP48678 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
LmnaP48678 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LmnaP48678 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.18□□□□□ -0.3
LmnaP48678 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
LmnaP48678 Gm8805-201ENSMUST00000117848 313 ntBASIC13.18□□□□□ -0.3
LmnaP48678 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.18□□□□□ -0.3
LmnaP48678 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC13.18□□□□□ -0.3
LmnaP48678 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LmnaP48678 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LmnaP48678 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LmnaP48678 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.18□□□□□ -0.3
LmnaP48678 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC13.18□□□□□ -0.3
LmnaP48678 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
LmnaP48678 Gm43378-201ENSMUST00000199336 582 ntBASIC13.18□□□□□ -0.3
LmnaP48678 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.18□□□□□ -0.3
LmnaP48678 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC13.18□□□□□ -0.3
LmnaP48678 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC13.18□□□□□ -0.3
LmnaP48678 AC154680.1-201ENSMUST00000224376 859 ntBASIC13.18□□□□□ -0.3
LmnaP48678 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LmnaP48678 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
LmnaP48678 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LmnaP48678 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LmnaP48678 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
LmnaP48678 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LmnaP48678 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LmnaP48678 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
LmnaP48678 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LmnaP48678 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LmnaP48678 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
LmnaP48678 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LmnaP48678 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
LmnaP48678 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LmnaP48678 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LmnaP48678 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
LmnaP48678 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LmnaP48678 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LmnaP48678 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LmnaP48678 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
LmnaP48678 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
LmnaP48678 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LmnaP48678 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LmnaP48678 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LmnaP48678 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
LmnaP48678 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LmnaP48678 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LmnaP48678 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
LmnaP48678 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.17□□□□□ -0.3
LmnaP48678 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LmnaP48678 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LmnaP48678 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LmnaP48678 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
LmnaP48678 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.17□□□□□ -0.3
LmnaP48678 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LmnaP48678 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.17□□□□□ -0.3
LmnaP48678 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LmnaP48678 Mir874-201ENSMUST00000104769 76 ntBASIC13.17□□□□□ -0.3
LmnaP48678 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
LmnaP48678 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LmnaP48678 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LmnaP48678 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC13.17□□□□□ -0.3
LmnaP48678 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LmnaP48678 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.17□□□□□ -0.3
LmnaP48678 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.17□□□□□ -0.3
LmnaP48678 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.17□□□□□ -0.3
LmnaP48678 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LmnaP48678 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
LmnaP48678 Morn2-202ENSMUST00000227729 656 ntBASIC13.17□□□□□ -0.3
LmnaP48678 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LmnaP48678 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
LmnaP48678 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
LmnaP48678 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LmnaP48678 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LmnaP48678 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms