Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Gm2495-201ENSMUST00000191160 466 ntBASIC11.08□□□□□ -0.64
GdnfP48540 Gm38144-201ENSMUST00000192790 465 ntBASIC11.08□□□□□ -0.64
GdnfP48540 Gm8515-201ENSMUST00000194852 576 ntBASIC11.08□□□□□ -0.64
GdnfP48540 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.08□□□□□ -0.64
GdnfP48540 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.08□□□□□ -0.64
GdnfP48540 Gm45384-201ENSMUST00000210451 277 ntBASIC11.08□□□□□ -0.64
GdnfP48540 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
GdnfP48540 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
GdnfP48540 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
GdnfP48540 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
GdnfP48540 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
GdnfP48540 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
GdnfP48540 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
GdnfP48540 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
GdnfP48540 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
GdnfP48540 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
GdnfP48540 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.08□□□□□ -0.64
GdnfP48540 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
GdnfP48540 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
GdnfP48540 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.07□□□□□ -0.64
GdnfP48540 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
GdnfP48540 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
GdnfP48540 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
GdnfP48540 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
GdnfP48540 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
GdnfP48540 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.07□□□□□ -0.64
GdnfP48540 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
GdnfP48540 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.07□□□□□ -0.64
GdnfP48540 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
GdnfP48540 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
GdnfP48540 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
GdnfP48540 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
GdnfP48540 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
GdnfP48540 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
GdnfP48540 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
GdnfP48540 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.07□□□□□ -0.64
GdnfP48540 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.07□□□□□ -0.64
GdnfP48540 Gm25116-201ENSMUST00000157191 122 ntBASIC11.07□□□□□ -0.64
GdnfP48540 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
GdnfP48540 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.07□□□□□ -0.64
GdnfP48540 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.07□□□□□ -0.64
GdnfP48540 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.07□□□□□ -0.64
GdnfP48540 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
GdnfP48540 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
GdnfP48540 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC11.07□□□□□ -0.64
GdnfP48540 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
GdnfP48540 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.07□□□□□ -0.64
GdnfP48540 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.07□□□□□ -0.64
GdnfP48540 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
GdnfP48540 Gm6983-201ENSMUST00000214912 628 ntBASIC11.07□□□□□ -0.64
GdnfP48540 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.07□□□□□ -0.64
GdnfP48540 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
GdnfP48540 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
GdnfP48540 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
GdnfP48540 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.07□□□□□ -0.64
GdnfP48540 Gm26315-201ENSMUST00000083890 321 ntBASIC11.07□□□□□ -0.64
GdnfP48540 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
GdnfP48540 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
GdnfP48540 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
GdnfP48540 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
GdnfP48540 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
GdnfP48540 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
GdnfP48540 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
GdnfP48540 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
GdnfP48540 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.07□□□□□ -0.64
GdnfP48540 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.07□□□□□ -0.64
GdnfP48540 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
GdnfP48540 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.07□□□□□ -0.64
GdnfP48540 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
GdnfP48540 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
GdnfP48540 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
GdnfP48540 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
GdnfP48540 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
GdnfP48540 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
GdnfP48540 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
GdnfP48540 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
GdnfP48540 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
GdnfP48540 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
GdnfP48540 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.06□□□□□ -0.64
GdnfP48540 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
GdnfP48540 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
GdnfP48540 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
GdnfP48540 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
GdnfP48540 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
GdnfP48540 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
GdnfP48540 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
GdnfP48540 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
GdnfP48540 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
GdnfP48540 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
GdnfP48540 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
GdnfP48540 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
GdnfP48540 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.06□□□□□ -0.64
GdnfP48540 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.06□□□□□ -0.64
GdnfP48540 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.06□□□□□ -0.64
GdnfP48540 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
GdnfP48540 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.06□□□□□ -0.64
GdnfP48540 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.06□□□□□ -0.64
GdnfP48540 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.06□□□□□ -0.64
GdnfP48540 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
GdnfP48540 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms