Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Mir339-201ENSMUST00000083659 96 ntBASIC11.8□□□□□ -0.52
Sox2P48432 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox2P48432 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sox2P48432 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox2P48432 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sox2P48432 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Sox2P48432 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox2P48432 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox2P48432 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Sox2P48432 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox2P48432 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox2P48432 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox2P48432 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.8□□□□□ -0.52
Sox2P48432 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.79□□□□□ -0.52
Sox2P48432 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox2P48432 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Sox2P48432 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox2P48432 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox2P48432 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox2P48432 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox2P48432 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox2P48432 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox2P48432 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Sox2P48432 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Sox2P48432 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox2P48432 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox2P48432 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox2P48432 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox2P48432 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC11.79□□□□□ -0.52
Sox2P48432 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.79□□□□□ -0.52
Sox2P48432 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.79□□□□□ -0.52
Sox2P48432 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC11.79□□□□□ -0.52
Sox2P48432 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox2P48432 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox2P48432 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox2P48432 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox2P48432 Gm28693-202ENSMUST00000190758 331 ntBASIC11.79□□□□□ -0.52
Sox2P48432 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.79□□□□□ -0.52
Sox2P48432 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox2P48432 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Sox2P48432 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox2P48432 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.79□□□□□ -0.52
Sox2P48432 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC11.79□□□□□ -0.52
Sox2P48432 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox2P48432 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox2P48432 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Sox2P48432 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox2P48432 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox2P48432 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox2P48432 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Sox2P48432 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.79□□□□□ -0.52
Sox2P48432 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.79□□□□□ -0.52
Sox2P48432 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox2P48432 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Sox2P48432 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox2P48432 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox2P48432 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox2P48432 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox2P48432 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox2P48432 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox2P48432 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox2P48432 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox2P48432 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox2P48432 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox2P48432 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox2P48432 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox2P48432 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox2P48432 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox2P48432 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Sox2P48432 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox2P48432 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Sox2P48432 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox2P48432 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.78□□□□□ -0.52
Sox2P48432 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox2P48432 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox2P48432 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox2P48432 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Sox2P48432 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox2P48432 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox2P48432 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox2P48432 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox2P48432 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Sox2P48432 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox2P48432 Gm12341-201ENSMUST00000119724 503 ntBASIC11.78□□□□□ -0.52
Sox2P48432 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.78□□□□□ -0.52
Sox2P48432 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Sox2P48432 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Sox2P48432 Mir6956-201ENSMUST00000183598 62 ntBASIC11.78□□□□□ -0.52
Sox2P48432 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.78□□□□□ -0.52
Sox2P48432 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.78□□□□□ -0.52
Sox2P48432 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.78□□□□□ -0.52
Sox2P48432 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.78□□□□□ -0.52
Sox2P48432 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Sox2P48432 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox2P48432 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox2P48432 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC11.78□□□□□ -0.52
Sox2P48432 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Sox2P48432 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox2P48432 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox2P48432 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms