Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.5
Cdx2P43241 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdx2P43241 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdx2P43241 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdx2P43241 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdx2P43241 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdx2P43241 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdx2P43241 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdx2P43241 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdx2P43241 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdx2P43241 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Cdx2P43241 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdx2P43241 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdx2P43241 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdx2P43241 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdx2P43241 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdx2P43241 Gm11989-201ENSMUST00000117240 672 ntBASIC11.95□□□□□ -0.5
Cdx2P43241 Gm13035-201ENSMUST00000117496 342 ntBASIC11.95□□□□□ -0.5
Cdx2P43241 Gm11362-201ENSMUST00000118838 850 ntBASIC11.95□□□□□ -0.5
Cdx2P43241 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.95□□□□□ -0.5
Cdx2P43241 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.95□□□□□ -0.5
Cdx2P43241 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdx2P43241 Gm10051-201ENSMUST00000145209 414 ntBASIC11.95□□□□□ -0.5
Cdx2P43241 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdx2P43241 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.95□□□□□ -0.5
Cdx2P43241 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdx2P43241 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.95□□□□□ -0.5
Cdx2P43241 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.95□□□□□ -0.5
Cdx2P43241 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.95□□□□□ -0.5
Cdx2P43241 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.95□□□□□ -0.5
Cdx2P43241 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.95□□□□□ -0.5
Cdx2P43241 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdx2P43241 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdx2P43241 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdx2P43241 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdx2P43241 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdx2P43241 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Cdx2P43241 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.95□□□□□ -0.5
Cdx2P43241 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.95□□□□□ -0.5
Cdx2P43241 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.95□□□□□ -0.5
Cdx2P43241 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Cdx2P43241 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdx2P43241 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdx2P43241 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Cdx2P43241 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdx2P43241 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdx2P43241 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.95□□□□□ -0.5
Cdx2P43241 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdx2P43241 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.95□□□□□ -0.5
Cdx2P43241 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Cdx2P43241 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdx2P43241 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.94□□□□□ -0.5
Cdx2P43241 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.94□□□□□ -0.5
Cdx2P43241 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdx2P43241 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdx2P43241 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdx2P43241 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdx2P43241 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Cdx2P43241 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
Cdx2P43241 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.94□□□□□ -0.5
Cdx2P43241 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.94□□□□□ -0.5
Cdx2P43241 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.94□□□□□ -0.5
Cdx2P43241 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.94□□□□□ -0.5
Cdx2P43241 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.94□□□□□ -0.5
Cdx2P43241 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdx2P43241 Gm18038-201ENSMUST00000197900 485 ntBASIC11.94□□□□□ -0.5
Cdx2P43241 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdx2P43241 Gm19994-201ENSMUST00000217086 586 ntBASIC11.94□□□□□ -0.5
Cdx2P43241 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.94□□□□□ -0.5
Cdx2P43241 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.94□□□□□ -0.5
Cdx2P43241 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdx2P43241 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdx2P43241 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdx2P43241 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdx2P43241 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdx2P43241 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdx2P43241 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdx2P43241 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdx2P43241 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdx2P43241 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdx2P43241 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdx2P43241 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdx2P43241 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdx2P43241 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdx2P43241 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdx2P43241 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdx2P43241 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cdx2P43241 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdx2P43241 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdx2P43241 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdx2P43241 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdx2P43241 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdx2P43241 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdx2P43241 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdx2P43241 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdx2P43241 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.93□□□□□ -0.5
Cdx2P43241 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdx2P43241 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdx2P43241 Gm22133-201ENSMUST00000102082 109 ntBASIC11.93□□□□□ -0.5
Cdx2P43241 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms