Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fen1P39749 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Fen1P39749 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.7□□□□□ -0.38
Fen1P39749 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fen1P39749 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Fen1P39749 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fen1P39749 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fen1P39749 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fen1P39749 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.7□□□□□ -0.38
Fen1P39749 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.7□□□□□ -0.38
Fen1P39749 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fen1P39749 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fen1P39749 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fen1P39749 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Fen1P39749 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.7□□□□□ -0.38
Fen1P39749 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Fen1P39749 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fen1P39749 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fen1P39749 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Fen1P39749 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Fen1P39749 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Fen1P39749 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Fen1P39749 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.7□□□□□ -0.38
Fen1P39749 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Fen1P39749 Gm28760-201ENSMUST00000185995 736 ntBASIC12.7□□□□□ -0.38
Fen1P39749 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Fen1P39749 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.7□□□□□ -0.38
Fen1P39749 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.7□□□□□ -0.38
Fen1P39749 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fen1P39749 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.7□□□□□ -0.38
Fen1P39749 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fen1P39749 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fen1P39749 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fen1P39749 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fen1P39749 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fen1P39749 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Fen1P39749 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Fen1P39749 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fen1P39749 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fen1P39749 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Fen1P39749 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fen1P39749 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fen1P39749 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fen1P39749 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fen1P39749 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fen1P39749 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.7□□□□□ -0.38
Fen1P39749 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Fen1P39749 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.69□□□□□ -0.38
Fen1P39749 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fen1P39749 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Fen1P39749 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fen1P39749 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Fen1P39749 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.69□□□□□ -0.38
Fen1P39749 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Fen1P39749 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Fen1P39749 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Fen1P39749 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fen1P39749 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fen1P39749 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Fen1P39749 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
Fen1P39749 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Fen1P39749 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Fen1P39749 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fen1P39749 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fen1P39749 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fen1P39749 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fen1P39749 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.69□□□□□ -0.38
Fen1P39749 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Fen1P39749 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fen1P39749 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Fen1P39749 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Fen1P39749 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fen1P39749 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Fen1P39749 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fen1P39749 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fen1P39749 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Fen1P39749 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fen1P39749 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fen1P39749 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fen1P39749 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Fen1P39749 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.69□□□□□ -0.38
Fen1P39749 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Fen1P39749 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.69□□□□□ -0.38
Fen1P39749 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.69□□□□□ -0.38
Fen1P39749 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.69□□□□□ -0.38
Fen1P39749 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Fen1P39749 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.68□□□□□ -0.38
Fen1P39749 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Fen1P39749 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Fen1P39749 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fen1P39749 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fen1P39749 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Fen1P39749 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fen1P39749 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Fen1P39749 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fen1P39749 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fen1P39749 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Fen1P39749 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fen1P39749 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.68□□□□□ -0.38
Fen1P39749 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms