Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC16.27■□□□□ 0.19
Col18a1P39061 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col18a1P39061 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col18a1P39061 Gm9924-202ENSMUST00000192760 2311 ntBASIC16.26■□□□□ 0.19
Col18a1P39061 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col18a1P39061 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col18a1P39061 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC16.26■□□□□ 0.19
Col18a1P39061 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
Col18a1P39061 Gm13445-201ENSMUST00000121664 307 ntBASIC16.26■□□□□ 0.19
Col18a1P39061 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC16.26■□□□□ 0.19
Col18a1P39061 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col18a1P39061 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Col18a1P39061 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC16.26■□□□□ 0.19
Col18a1P39061 Gm37638-201ENSMUST00000194337 1123 ntBASIC16.26■□□□□ 0.19
Col18a1P39061 Gm44882-201ENSMUST00000205702 802 ntBASIC16.26■□□□□ 0.19
Col18a1P39061 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC16.26■□□□□ 0.19
Col18a1P39061 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC16.26■□□□□ 0.19
Col18a1P39061 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col18a1P39061 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col18a1P39061 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col18a1P39061 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col18a1P39061 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Col18a1P39061 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col18a1P39061 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col18a1P39061 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col18a1P39061 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col18a1P39061 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col18a1P39061 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col18a1P39061 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col18a1P39061 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col18a1P39061 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Col18a1P39061 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Col18a1P39061 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col18a1P39061 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col18a1P39061 AC154262.2-201ENSMUST00000224310 2293 ntBASIC16.26■□□□□ 0.19
Col18a1P39061 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Col18a1P39061 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col18a1P39061 Gm12274-201ENSMUST00000120062 385 ntBASIC16.26■□□□□ 0.19
Col18a1P39061 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC16.26■□□□□ 0.19
Col18a1P39061 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col18a1P39061 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC16.26■□□□□ 0.19
Col18a1P39061 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Col18a1P39061 Gm25554-201ENSMUST00000158075 113 ntBASIC16.26■□□□□ 0.19
Col18a1P39061 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col18a1P39061 Gm37826-201ENSMUST00000195329 322 ntBASIC16.26■□□□□ 0.19
Col18a1P39061 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC16.26■□□□□ 0.19
Col18a1P39061 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC16.26■□□□□ 0.19
Col18a1P39061 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col18a1P39061 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Col18a1P39061 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col18a1P39061 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col18a1P39061 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col18a1P39061 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col18a1P39061 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col18a1P39061 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col18a1P39061 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Col18a1P39061 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC16.25■□□□□ 0.19
Col18a1P39061 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col18a1P39061 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col18a1P39061 Il17rd-203ENSMUST00000225146 3366 ntBASIC16.25■□□□□ 0.19
Col18a1P39061 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Col18a1P39061 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col18a1P39061 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col18a1P39061 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col18a1P39061 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col18a1P39061 Gm14395-201ENSMUST00000120494 563 ntBASIC16.25■□□□□ 0.19
Col18a1P39061 Gm15620-201ENSMUST00000122949 270 ntBASIC16.25■□□□□ 0.19
Col18a1P39061 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC16.25■□□□□ 0.19
Col18a1P39061 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC16.25■□□□□ 0.19
Col18a1P39061 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC16.25■□□□□ 0.19
Col18a1P39061 AC164087.2-201ENSMUST00000216206 1072 ntBASIC16.25■□□□□ 0.19
Col18a1P39061 Gm7940-201ENSMUST00000218195 769 ntBASIC16.25■□□□□ 0.19
Col18a1P39061 AC153152.3-201ENSMUST00000222188 1135 ntBASIC16.25■□□□□ 0.19
Col18a1P39061 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col18a1P39061 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col18a1P39061 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col18a1P39061 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col18a1P39061 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col18a1P39061 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Col18a1P39061 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col18a1P39061 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col18a1P39061 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Col18a1P39061 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Col18a1P39061 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col18a1P39061 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC16.24■□□□□ 0.19
Col18a1P39061 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col18a1P39061 Gm11957-201ENSMUST00000118304 779 ntBASIC16.24■□□□□ 0.19
Col18a1P39061 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC16.24■□□□□ 0.19
Col18a1P39061 Gm6450-201ENSMUST00000200896 574 ntBASIC16.24■□□□□ 0.19
Col18a1P39061 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC16.24■□□□□ 0.19
Col18a1P39061 AC118639.2-201ENSMUST00000226289 223 ntBASIC16.24■□□□□ 0.19
Col18a1P39061 CT030652.1-201ENSMUST00000227377 1235 ntBASIC16.24■□□□□ 0.19
Col18a1P39061 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col18a1P39061 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Col18a1P39061 Mir326-201ENSMUST00000083637 95 ntBASIC16.24■□□□□ 0.19
Col18a1P39061 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Col18a1P39061 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Col18a1P39061 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col18a1P39061 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Col18a1P39061 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms