Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Upk2P38575 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Upk2P38575 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Upk2P38575 Gm45784-201ENSMUST00000188360 142 ntBASIC11.05□□□□□ -0.64
Upk2P38575 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Upk2P38575 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.05□□□□□ -0.64
Upk2P38575 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.05□□□□□ -0.64
Upk2P38575 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.05□□□□□ -0.64
Upk2P38575 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Upk2P38575 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk2P38575 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk2P38575 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Upk2P38575 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk2P38575 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk2P38575 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.05□□□□□ -0.64
Upk2P38575 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Upk2P38575 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk2P38575 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk2P38575 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk2P38575 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Upk2P38575 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk2P38575 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.05□□□□□ -0.64
Upk2P38575 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk2P38575 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk2P38575 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.04□□□□□ -0.64
Upk2P38575 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk2P38575 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk2P38575 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Upk2P38575 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Upk2P38575 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Upk2P38575 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk2P38575 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Upk2P38575 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk2P38575 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk2P38575 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk2P38575 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Upk2P38575 Daam2-202ENSMUST00000224595 1926 ntBASIC11.04□□□□□ -0.64
Upk2P38575 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.04□□□□□ -0.64
Upk2P38575 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Upk2P38575 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk2P38575 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk2P38575 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.04□□□□□ -0.64
Upk2P38575 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Upk2P38575 Gm13226-201ENSMUST00000117838 404 ntBASIC11.04□□□□□ -0.64
Upk2P38575 Gm14660-201ENSMUST00000119809 575 ntBASIC11.04□□□□□ -0.64
Upk2P38575 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.04□□□□□ -0.64
Upk2P38575 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Upk2P38575 Gm25261-201ENSMUST00000157416 134 ntBASIC11.04□□□□□ -0.64
Upk2P38575 Gm16379-201ENSMUST00000161469 348 ntBASIC11.04□□□□□ -0.64
Upk2P38575 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.04□□□□□ -0.64
Upk2P38575 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Upk2P38575 Gm6222-202ENSMUST00000182143 629 ntBASIC11.04□□□□□ -0.64
Upk2P38575 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Upk2P38575 Gm8762-201ENSMUST00000193486 339 ntBASIC11.04□□□□□ -0.64
Upk2P38575 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Upk2P38575 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk2P38575 Gm5904-201ENSMUST00000210286 865 ntBASIC11.04□□□□□ -0.64
Upk2P38575 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.04□□□□□ -0.64
Upk2P38575 Gm45930-201ENSMUST00000221330 292 ntBASIC11.04□□□□□ -0.64
Upk2P38575 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.04□□□□□ -0.64
Upk2P38575 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.04□□□□□ -0.64
Upk2P38575 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.04□□□□□ -0.64
Upk2P38575 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk2P38575 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk2P38575 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk2P38575 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk2P38575 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk2P38575 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Upk2P38575 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk2P38575 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Upk2P38575 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk2P38575 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.04□□□□□ -0.64
Upk2P38575 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk2P38575 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk2P38575 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk2P38575 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk2P38575 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Upk2P38575 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk2P38575 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Upk2P38575 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Upk2P38575 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.03□□□□□ -0.64
Upk2P38575 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Upk2P38575 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Upk2P38575 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.03□□□□□ -0.64
Upk2P38575 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Upk2P38575 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk2P38575 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk2P38575 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Upk2P38575 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk2P38575 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk2P38575 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk2P38575 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.03□□□□□ -0.64
Upk2P38575 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk2P38575 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk2P38575 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk2P38575 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk2P38575 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Upk2P38575 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk2P38575 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.03□□□□□ -0.64
Upk2P38575 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms